Releases: uab-cgds-worthey/rosalution
Releases · uab-cgds-worthey/rosalution
0.8.3
Rosalution 0.8.3
Maintainers
@SeriousHorncat
@JmScherer
@fatimarabab
Features
- Rendering layout for annotations of genes and variants are configurable without code update.
Contributors
SeriousHorncat, JmScherer, and fatimarabab
Assets 2
0.8.2
Rosalution 0.8.2
Maintainers
@SeriousHorncat
@JmScherer
@fatimarabab
Features
- Added support for attaching genbank (.gb) files for supporting evidence attachments
Development
- Minimum NodeJS version increased to v23.4 to support upgrading package dependencies to avoid reported vulnerabilities
- ESlint upgrade to 9 and migrating configuration to flat file config
Bugs
- Backend starts takes over the shell process allowing it to receive SIGTERM for graceful shutdown
Contributors
SeriousHorncat, JmScherer, and fatimarabab
Assets 2
Rosalution 0.8.1
Rosalution 0.8.1
Maintainers
@SeriousHorncat
@JmScherer
@fatimarabab
Features
- Composition API Migration for moving towards real-time collaboration
- New annotation linkouts for COSMIC, and gnomAD4 Variant, and annotations for REVEL and AlphaMissense. New data source
using OpenCravat. VCF string provided by Ensembl's API is cached in the MongoDB database. - Updated a row to render datasets horizontal if the associated class is included in the rendering configuration.
Variant annotations were rendering vertically and it was taking too much space. - Analyses have a version manifest of annotation's dataset, source, and version
- Increased VueJS version to 3.5.12 to use TemplateRef as a feature
- Added support for attaching genbank (.gb) files for supporting evidence attachments
Development
- Minimum NodeJS version increased to v23.4 to support upgrading package dependencies to avoid reported vulnerabilities
- ESlint upgrade to 9 and migrating configuration to flat file config
Bugs
- Fixed developer API endpoint so that existing analyses can queue their annotations to be rendered again if desired.
- Backend starts takes over the shell process allowing it to receive SIGTERM for graceful shutdown
Contributors
SeriousHorncat, JmScherer, and fatimarabab
Assets 2
Rosalution 0.8.0
0.8.0
Maintainers
@SeriousHorncat
@JmScherer
@fatimarabab
Features
- Support for attaching documents, URLs, and Images to fields on an Analysis landing page.
- HTTPs by default for deployments
- Versioning for Annotations as dictated by configuration
- Analyses have a version manifest of annotation's dataset, source, and version
- Render's annotations for an analysis according to it's version manifest
- Timestamped discussions for analyses to which allow users to create, update, and remove text-based
messages to each other within an analysis.
Contributors
SeriousHorncat, JmScherer, and fatimarabab
Assets 2
Rosalution: Supporting data accessibility, integration, curation, interoperability, and reuse for precision animal modeling
Maintainers
New Contributors
- @jbarkley256 made their first contribution in #61
What's Changed
- Importing cases for analysis, with support of automated configured annotations of genomic units with support at curating evidence for analysis review.
- Attachment of supporting evidence as files or URLs
- Support for researchers entering case relevant information to be disseminated to research team
- Multi image attachment for curated figures for analyses
- Attachment of visual annotations associated with genomic units
- Viewing annotations for the genomic units in a case for analysis
- CAS user login, enabling organizations to connect to their Center Authentication Service for user credentials
- Filtering available analyses by data presented on analysis cards in the analysis feed
- Workflows to change analyses from being in preparation to ready, active, approved, declined, on-hold
- 3rd party attachments to link Monday.com and Phenotips URL to the specific analysis
Paper Update
- Updated affiliations to include the country for each of them.
Full Changelog: 0.6.0-er...0.6.1
Contributors
SeriousHorncat, JmScherer, and 2 other contributors
Assets 2
Rosalution 0.6.0 - Supporting data accessibility, integration, curation, interoperability, and reuse for precision animal modeling
Maintainers
New Contributors
- @jbarkley256 made their first contribution in #61
What's Changed
- Importing cases for analysis, with support of automated configured annotations of genomic units with support at curating evidence for analysis review.
- Attachment of supporting evidence as files or URLs
- Support for researchers entering case relevant information to be disseminated to research team
- Multi image attachment for curated figures for analyses
- Attachment of visual annotations associated with genomic units
- Viewing annotations for the genomic units in a case for analysis
- CAS user login, enabling organizations to connect to their Center Authentication Service for user credentials
- Filtering available analyses by data presented on analysis cards in the analysis feed
- Workflows to change analyses from being in preparation to ready, active, approved, declined, on-hold
- 3rd party attachments to link Monday.com and Phenotips URL to the specific analysis
Full Changelog: 0.6.0-er...0.6.0
Contributors
SeriousHorncat, JmScherer, and 2 other contributors
Assets 2
Rosalution 0.6.0 - Engineering Release
An engineering release of version 0.6.0 of Rosalution.
What's Changed
- Importing cases for Analysis, resulting in the automated annotation genomic units configured
- Attachment of supporting evidence as files from a researcher's local machine or URLs
- Support for researchers entering case relevant information to be disseminated to research team
- Attaching an image of a pedigree chart for a case
- Attachment of visual annotations associated with genomic units
- Viewing annotations for the genomic units in a case for analysis
- CAS user login, enabling organizations to connect to their Center Authentication Service for user credentials
Contributors
Full Changelog: https://github.com/uab-cgds-worthey/rosalution/commits/0.6.0-er
Contributors
SeriousHorncat, kuthedk, and 2 other contributors