Used jq to read all JSON files in the project and reformat them to st…

…andardize the JSON
uab-cgds-worthey · Jan 6, 2025 · 0db78eb · 0db78eb
1 parent 593fd58
commit 0db78eb
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Showing 27 changed files with 5,996 additions and 5,409 deletions.
diff --git a/backend/annotation-render-layout.json b/backend/annotation-render-layout.json
diff --git a/backend/tests/fixtures/analysis-CPAM0002.json b/backend/tests/fixtures/analysis-CPAM0002.json
@@ -8,78 +8,85 @@
         "data_source": "Ensembl",
         "version": "112"
       }
-    }, {
+    },
+    {
       "Polyphen Score": {
-          "data_source": "Ensembl",
-          "version": "112"
-        }
-    },{
+        "data_source": "Ensembl",
+        "version": "112"
+      }
+    },
+    {
       "Entrez Gene Id": {
         "data_source": "Rosalution",
         "version": "rosalution-manifest-00"
       }
-    },{
+    },
+    {
       "HPO_NCBI_GENE_ID": {
         "data_source": "HPO",
         "version": "2024-09-06"
       }
-    },{
+    },
+    {
       "Ensembl Gene Id": {
         "data_source": "Ensembl",
         "version": "112"
       }
-    },{
+    },
+    {
       "ClinGen_gene_url": {
         "data_source": "Rosalution",
         "version": "rosalution-manifest-00"
       }
-    },{
+    },
+    {
       "OMIM": {
         "data_source": "HPO",
         "version": "2024-09-06"
       }
-    },{
+    },
+    {
       "ClinVar_Variantion_Id": {
         "data_source": "Rosalution",
         "version": "rosalution-manifest-00"
       }
-    },{
+    },
+    {
       "HGNC_ID": {
         "data_source": "Ensembl",
         "version": "112"
       }
-    },{
+    },
+    {
       "ClinVar_variant_url": {
-          "data_source": "Rosalution",
-          "version": "rosalution-manifest-00"
-    }
-    }, {
-    "SIFT Score": 
-      {
+        "data_source": "Rosalution",
+        "version": "rosalution-manifest-00"
+      }
+    },
+    {
+      "SIFT Score": {
         "data_source": "Ensembl",
         "version": "112"
       }
-    }, {
-      "Consequences": 
-        {
-          "data_source": "Ensembl",
-          "version": "112"
-        }
-      },
-      {
-      "SIFT Prediction": 
-        {
-          "data_source": "Ensembl",
-          "version": "112"
-        }
-      },
-      {
-        "transcript_id": 
-          {
-            "data_source": "Ensembl",
-            "version": "112"
-          }
-        }
+    },
+    {
+      "Consequences": {
+        "data_source": "Ensembl",
+        "version": "112"
+      }
+    },
+    {
+      "SIFT Prediction": {
+        "data_source": "Ensembl",
+        "version": "112"
+      }
+    },
+    {
+      "transcript_id": {
+        "data_source": "Ensembl",
+        "version": "112"
+      }
+    }
   ],
   "genomic_units": [
     {
@@ -346,4 +353,4 @@
       "comments": "hello world"
     }
   ]
-}
+}