Modelling the Language of Life - Deep Learning Protein Sequences

A minimal desktop app for easy and convenient gene annotation and lookup.

Unsupervised neural network for learning embeddings of GO terms.

A curated list of awesome protein design research, software and resources.

Mutual Interactors: A graph-based machine learning model with applications in molecular phenotype prediction

Multi-label protein function annotation

Datasets with embeddings and other representations for all proteins in Uniprot/Swiss-Prot

Identify small-molecule sites of labeling that are annotated as active sites, binding sites, disulfide bonds and redox active sites

FUSE-PhyloTree enables to identify sequence conservation modules and associate them with functional annotations through phylogenomic analysis.

Functional annotation transfer tool in Golang.

Quantify the druggable chemical space, functional pathways and protein classes targeted by novel small molecules and state-of-the-art proteomics methodologies