dcm2nii DICOM to NIfTI converter: compiled versions available from NITRC

Alzheimer's Disease Prediction by using ResNet, AlexNet

A deep learning based approach for brain tumor MRI segmentation.

A NIfTI (nii.gz) 3D Visualizer using VTK and Qt5

Convert NIfTI volume to triangulated mesh using marching cubes

RESTful PACS server with plugins

Prostate MR Image Segmentation 2012

Harmonization of multi-site imaging data with ComBat (Python)

Deep learning based skull stripping and FLAIR abnormality segmentation in brain MRI using U-Net

Building an ACL tear detector to spot knee injuries from MRIs with PyTorch (MRNet)

Multi-modal medical image fusion to detect brain tumors using MRI and CT images

PyTorch Implementation of QuickNAT and Bayesian QuickNAT, a fast brain MRI segmentation framework with segmentation Quality control using structure-wise uncertainty

Segmentation for vertebra in MR images

Utilities to download and load an MRI brain tumor dataset with Python, providing 2D slices, tumor masks and tumor classes.

Developing a UNet3D model for accurate MRI skull stripping using the Calgary Campinas 359 dataset, enhancing neuroimaging preprocessing workflows.

⚕️ An educational tool to visualise k-space and aid the understanding of MRI image generation

Julia module for reading/writing NIfTI MRI files

A Tensorflow implementation of SegNet for cardiac MRI segmentation

Convolutional AutoEncoder application on MRI images

VisualQC : assistive tool to ease the quality control workflow of neuroimaging data.