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[Platform]: Added EPMC co-occurences and tissue specificity to list #296

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Nov 21, 2023
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41 changes: 30 additions & 11 deletions apps/platform/src/pages/DownloadsPage/dataset-mappings.json
Original file line number Diff line number Diff line change
Expand Up @@ -116,12 +116,21 @@
"include_in_fe": true,
"include_in_bq": true
},
{
"id": "expressionSpecificity",
"category": "Target",
"nice_name": "Target - baseline expression (tissue specificity)",
"description": "Tissue specific baseline RNA and protein expression data for targets",
"order": 14,
"include_in_fe": true,
"include_in_bq": true
},
{
"id": "go",
"category": "Target",
"nice_name": "Target - gene ontology",
"description": "Gene ontology annotations for targets",
"order": 14,
"order": 15,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -130,7 +139,7 @@
"category": "Target",
"nice_name": "Target - mouse phenotypes",
"description": "Mouse phenotype data for targets",
"order": 15,
"order": 16,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -139,7 +148,7 @@
"category": "Disease/Phenotype",
"nice_name": "Disease/Phenotype - clinical signs and symptoms",
"description": "Clinical signs and symptoms linked to diseases and phenotypes",
"order": 16,
"order": 17,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -148,7 +157,7 @@
"category": "Disease/Phenotype",
"nice_name": "Human Phenotype Ontology",
"description": "Human Phenotype Ontology subset of information included in the Platform",
"order": 17,
"order": 18,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -157,7 +166,7 @@
"category": "Drug",
"nice_name": "Drug - mechanism of action",
"description": "Mechanisms of action for drug molecules",
"order": 18,
"order": 19,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -166,7 +175,7 @@
"category": "Drug",
"nice_name": "Drug - indications",
"description": "Approved and investigational indications for drug molecules",
"order": 19,
"order": 20,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -175,7 +184,7 @@
"category": "Drug",
"nice_name": "Drug - pharmacovigilance",
"description": "Significant adverse events for drug molecules",
"order": 20,
"order": 21,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -184,7 +193,7 @@
"category": "Drug",
"nice_name": "Drug - withdrawn and black box warnings",
"description": "Blackbox and withdrawn information for drug molecules",
"order": 21,
"order": 23,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -202,7 +211,7 @@
"category": "Target",
"nice_name": "Target - Reactome pathway information",
"description": "Reactome pathway data used to annotate targets",
"order": 22,
"order": 24,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -211,7 +220,7 @@
"category": "Target",
"nice_name": "Target - Prioritisation",
"description": "List of target-specific attributes from the Target Engine project",
"order": 24,
"order": 25,
"include_in_fe": true,
"include_in_bq": true
},
Expand All @@ -220,7 +229,7 @@
"category": "Target",
"nice_name": "Target - DepMap essentiality",
"description": "Target essentiality assessments from DepMap Portal",
"order": 23,
"order": 26,
"include_in_fe": true,
"include_in_bq": true
},
Expand Down Expand Up @@ -304,6 +313,15 @@
"order": null,
"include_in_fe": false,
"include_in_bq": false
},
{
"id": "epmcCooccurrences",
"category": "Target",
"nice_name": "n/a",
"description": "Normalized cooccurrences for EPMC",
"order": null,
"include_in_fe": false,
"include_in_bq": false
},
{
"id": "adverseDrugReactions",
Expand All @@ -323,6 +341,7 @@
"include_in_fe": false,
"include_in_bq": false
},

{
"id": "significantAdverseTargetReactions",
"category": "Drug",
Expand Down
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