v9.2.0

PR #1400 introduces a breaking change requiring migration: websites values must not contain a DOI-like pattern. Migrator Migrator_from_9_1_to_9_2 is included in this release's project.Makefile

What's Changed

• Fix broken URI links on enum documentation pages by @sujaypatil96 in #1301
• Return the transformed study from the transformation function by @eecavanna in #1312
• add ORCID prefix expansion to nmdc.yaml by @turbomam in #1319
• Add OBI prefix expansions by @turbomam in #1318
• removed # comments and most deprecated elements by @turbomam in #1322
• null migration by @turbomam in #1323
• committed to emsl_project_identifiers by @turbomam in #1324
• has_part with NamedThing domain and range by @turbomam in #1345
• Refactor migrator classes into own modules and fix YAML file loading by @eecavanna in #1340
• added biosample prefix expansion by @turbomam in #1354
• Fix see_also link in external_identifier type by @sujaypatil96 in #1355
• Add doctests to example transformation function by @eecavanna in #1357
• add artifact upload to 'migration' action by @turbomam in #1363
• Refactor LabDevice, Instrument and InstrumentValue by @turbomam in #1332
• Add doctests to existing migration classes by @eecavanna in #1384
• linkml ^1.6.3 linkml-runtime ^1.6.2 by @turbomam in #1388
• update prov Activity description by @turbomam in #1390
• Add data_management_plan_doi enum by @brynnz22 in #1391
• include typecodes endpoint in static docs by @turbomam in #1392
• mkdocs.yml update after adding mention of typecode api by @turbomam in #1395
• Mark's update to mkdocs.yml by @turbomam in #1396
• Update make target to run all migrators' doctests (and fix bug in test) by @eecavanna in #1399
• don't use jsonschema library by @turbomam in #1401
• add element deprecation documentation by @brynnz22 in #1393
• add edi and zenodo permissible values by @brynnz22 in #1405
• Add FiltrationProcess class and supporting slots and enumerations by @JamesTessmer in #1326
• 1327 adding MixingProcess class for materialprocessing by @JamesTessmer in #1407
• Redirect /home to / on documentation website (mkdocs) by @eecavanna in #1410
• no special polymorphic dir or target by @turbomam in #1413
• Remove stray white space in MixingProcess description. by @JamesTessmer in #1416
• import host_disease_stat from MIxS by @turbomam in #1408
• Hyperlink all URLs that appear in in free text on documentation pages by @sujaypatil96 in #1417
• 1337 add slot bulk elect conductivity by @bmeluch in #1352
• host_disease_stat workarround plus PATO exp by @turbomam in #1425
• add regex pattern to websites slot: DOI-like values not allowed by @brynnz22 in #1400

New Contributors

• @bmeluch made their first contribution in #1352

Full Changelog: v9.1.0...v9.2.0