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update NEON instrument mapping file URL in @repository
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@sujaypatil96
sujaypatil96 committed Feb 12, 2025
1 parent 835313c commit 1d17dbf
Showing 1 changed file with 6 additions and 6 deletions.
12 changes: 6 additions & 6 deletions nmdc_runtime/site/repository.py
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Original file line number Diff line number Diff line change
Expand Up @@ -652,7 +652,7 @@ def biosample_submission_ingest():
"inputs": {
"neon_envo_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/neon_mixs_env_triad_mappings/neon-nlcd-local-broad-mappings.tsv",
"neon_raw_data_file_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/misc/neon_raw_data_file_mappings.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/berkeley-schema-fy24/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
}
},
},
Expand Down Expand Up @@ -694,7 +694,7 @@ def biosample_submission_ingest():
"inputs": {
"neon_envo_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/neon_mixs_env_triad_mappings/neon-nlcd-local-broad-mappings.tsv",
"neon_raw_data_file_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/misc/neon_raw_data_file_mappings.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/berkeley-schema-fy24/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
}
},
},
Expand Down Expand Up @@ -737,7 +737,7 @@ def biosample_submission_ingest():
"inputs": {
"neon_envo_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/neon_mixs_env_triad_mappings/neon-nlcd-local-broad-mappings.tsv",
"neon_raw_data_file_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/misc/neon_raw_data_file_mappings.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/berkeley-schema-fy24/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
}
},
"get_neon_pipeline_benthic_data_product": {
Expand Down Expand Up @@ -779,7 +779,7 @@ def biosample_submission_ingest():
"inputs": {
"neon_envo_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/neon_mixs_env_triad_mappings/neon-nlcd-local-broad-mappings.tsv",
"neon_raw_data_file_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/misc/neon_raw_data_file_mappings.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/berkeley-schema-fy24/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
}
},
},
Expand Down Expand Up @@ -822,7 +822,7 @@ def biosample_submission_ingest():
"inputs": {
"neon_envo_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/neon_mixs_env_triad_mappings/neon-nlcd-local-broad-mappings.tsv",
"neon_raw_data_file_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/misc/neon_raw_data_file_mappings.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/berkeley-schema-fy24/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
}
},
"get_neon_pipeline_surface_water_data_product": {
Expand Down Expand Up @@ -864,7 +864,7 @@ def biosample_submission_ingest():
"inputs": {
"neon_envo_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/neon_mixs_env_triad_mappings/neon-nlcd-local-broad-mappings.tsv",
"neon_raw_data_file_mappings_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/main/assets/misc/neon_raw_data_file_mappings.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/berkeley-schema-fy24/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
"neon_nmdc_instrument_mapping_file_url": "https://raw.githubusercontent.com/microbiomedata/nmdc-schema/refs/heads/main/assets/misc/neon_sequencingMethod_to_nmdc_instrument_set.tsv",
}
},
},
Expand Down

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