Update docker image to newest version

Passing unit test in Docker

Dockerfile

@@ -1,4 +1,4 @@
-FROM tensorflow1.2.1-py36
+FROM tensorflow2.12.0-py310
 
 WORKDIR /Kaiko_pipeline
 ADD ./Kaiko_denovo /Kaiko_pipeline/Kaiko_denovo
@@ -11,4 +11,4 @@ ADD ./unit_test_util.py /Kaiko_pipeline
 ADD ./kaiko_defaults.yaml /Kaiko_pipeline
 
 RUN pip install --no-cache-dir --upgrade pip && \ 
-    pip install --no-cache-dir llvmlite==0.22 biopython==1.69 numba==0.37 pyteomics sigopt==3.2.0 memory-profiler pyyaml pathlib s3path
+    pip install --no-cache-dir llvmlite==0.39.1 biopython==1.81 numba==0.56.4 pyteomics sigopt==3.2.0 memory-profiler pyyaml pathlib s3path

Dockerfile_tensorflow2.12.0-py310

@@ -0,0 +1,10 @@
+FROM python:3.10
+RUN apt-get update && \
+    apt-get install -y --no-install-recommends         build-essential         curl         libfreetype6-dev         libpng-dev         libzmq3-dev         pkg-config         python3         python3-dev         rsync         software-properties-common         unzip         && \
+    apt-get clean && \
+    rm -rf /var/lib/apt/lists/*
+RUN pip3 --no-cache-dir install https://files.pythonhosted.org/packages/3f/b2/33372601ed71fb41049642f8f6e1e142215e8b5c3463df434fc8885db278/tensorflow-2.12.0-cp310-cp310-manylinux_2_17_x86_64.manylinux2014_x86_64.whl
+RUN pip3 --no-cache-dir install         ipykernel         jupyter         matplotlib         numpy         scipy         scikit-learn         pandas         Pillow         && \
+    python3 -m ipykernel.kernelspec
+CMD ["/bin/bash"]
+MAINTAINER Camilo Posso <camilo.posso@pnnl.gov>

Kaiko_volume/config.yaml

@@ -1,7 +1,7 @@
 denovo:
   multi_decode: true
-  mgf_dir: Kaiko_volume/Kaiko_input_files/mgf_small
+  mgf_dir: Kaiko_volume/Kaiko_input_files/mgf_large
 diamond tally:
-  diamond_folder: 'Kaiko_volume/Kaiko_stationary_files/diamond'
+  diamond_folder: Kaiko_volume/Kaiko_stationary_files/diamond-2.0.15