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try to fix Genrich test failing
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katarzyna.otylia.sikora@gmail.com committed Jan 4, 2024
1 parent 194fa56 commit 6ed5571
Showing 1 changed file with 2 additions and 2 deletions.
4 changes: 2 additions & 2 deletions tests/test_jobcounts.py
Original file line number Diff line number Diff line change
Expand Up @@ -556,15 +556,15 @@ def test_default_noInput(self, ifs):
print(' '.join([str(i) for i in ci]))
_p = sp.run(ci, capture_output=True, text=True)
assert _p.returncode == 0
assert parseSpOut(_p) == 57
assert parseSpOut(_p) == 56
def test_genrich_noInput(self, ifs):
ci = [
"ChIP-seq",
'-d',
ifs / 'bam_input',
'--sampleSheet',
ifs / 'sampleSheet.tsv',
'--peakCaller Genrich',
' --peakCaller Genrich ',
'--snakemakeOptions',
SMKOPTS,
ifs / 'org.yaml',
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