Skip to content

Commit

Permalink
fix CRAN additional issues error with ATLAS
Browse files Browse the repository at this point in the history
  • Loading branch information
levenc committed Feb 4, 2025
1 parent f475714 commit eab700e
Show file tree
Hide file tree
Showing 57 changed files with 10,457 additions and 717 deletions.
15 changes: 7 additions & 8 deletions DESCRIPTION
Original file line number Diff line number Diff line change
@@ -1,6 +1,6 @@
Package: posologyr
Title: Individual Dose Optimization using Population Pharmacokinetics
Version: 1.2.7
Version: 1.2.8
Authors@R: c(
person("Cyril","Leven",role = c("aut", "cre","cph"),
email = "cyril.leven@chu-brest.fr",
Expand All @@ -12,13 +12,12 @@ Authors@R: c(
person("Audrey","Lavenu",role = c("ctb")),
person("Marc","Lavielle",role = c("ctb"))
)
Description: Optimize drug regimens through model-informed precision dosing,
using individual pharmacokinetic (PK) and pharmacokinetic-pharmacodynamic
(PK-PD) profiles. By integrating therapeutic drug monitoring (TDM) data with
population models, 'posologyr' provides accurate posterior estimates and
enables the calculation of personalized dosing regimens. The empirical Bayes
estimates are computed following the method described by Kang et al. (2012)
<doi:10.4196/kjpp.2012.16.2.97>.
Description: Personalize drug regimens using individual pharmacokinetic (PK) and
pharmacokinetic-pharmacodynamic (PK-PD) profiles. By combining therapeutic
drug monitoring (TDM) data with a population model, 'posologyr' offers
accurate posterior estimates and helps compute optimal individualized dosing
regimens. The empirical Bayes estimates are computed following the method
described by Kang et al. (2012) <doi:10.4196/kjpp.2012.16.2.97>.
License: AGPL-3
Encoding: UTF-8
Roxygen: list(markdown = TRUE)
Expand Down
5 changes: 4 additions & 1 deletion NEWS.md
Original file line number Diff line number Diff line change
@@ -1,3 +1,6 @@
# posologyr v1.2.8
* Relax the requirements of a dose optimization test using TDM data to account for computational differences observed with the alternative BLAS ATLAS on CRAN.

# posologyr v1.2.7

* All vignettes are moved to articles
Expand Down Expand Up @@ -52,7 +55,7 @@ with interpolation of covariates, to make plotting easier

## Additional features
* `poso_estim_map()`, `poso_estim_sir()` and `poso_estim_mcmc()` can now estimate individual PK profiles for multiple endpoints models (eg. PK-PD, parent-metabolite, blood-CSF...), using a different residual error model for each endpoint.
* `poso_time_cmin()`, `poso_dose_conc()`, `poso_dose_auc()` and `poso_inter_cmin()` now allow you to select the end point of interest for which you want to optimise, provided it is defined in the model.
* `poso_time_cmin()`, `poso_dose_conc()`, `poso_dose_auc()` and `poso_inter_cmin()` now allow you to select the end point of interest for which you want to optimize, provided it is defined in the model.

## Documentation
* `vignette("a_priori_dosing")` illustrates a priori dose selection
Expand Down
8 changes: 4 additions & 4 deletions docs/404.html

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

6 changes: 3 additions & 3 deletions docs/LICENSE.html

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

36 changes: 18 additions & 18 deletions docs/articles/a_posteriori_dosing.html

Some generated files are not rendered by default. Learn more about how customized files appear on GitHub.

Loading
Sorry, something went wrong. Reload?
Sorry, we cannot display this file.
Sorry, this file is invalid so it cannot be displayed.
Loading

0 comments on commit eab700e

Please sign in to comment.