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Helen Burns edited this page Sep 6, 2018 · 23 revisions

IT Tips for myself and others

In 2014-2016 I ran an introduction to the NOC UNIX systems, hosting a repository to my GitHub page. I will continue to host these notes but in a more generalised manner since leaving NOC.

These notes are written in markdown

UNIX

Remote File systems

A useful file mounter for accessing your server files from home!

Python

This is a package of python modules, like your toolboxes in Matlab. Recommended to use!

These are a web based GUI for developing python scripts. You can add markdown comments (the same way I have written this wiki) and Latex maths to explain your code. It has inline plotting, terminal access and use bash commands. These notebooks can be transferred into a normal python script with the click of a button and give you access to your scripts from any computer with VPN and a web browser!

BASH

If you swap to bash here's a .bashrc to get you started

Useful commands I've found and want to remember!

NCO

The NetCDF Operators are invaluable tools for quick manipulation of NetCDF files. Here I add a list of commands I use and want for reference! Perhaps a good starting point!

ncview allows you to view NetCDF files!

Version Control

How to set up online git hub repository, Free private repositories for students!

High-Performance Computing

Parallel MPI runs on Mobilis

Small analysis jobs on one core

Run a series of jobs automatically etc

NOC specific (will no be updated)

Dr Maike Sonnewald kindly provided her latex master template for the correct to the guidelines PhD Thesis for Southampton university!