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In 2014-2016 I ran an introduction to the NOC UNIX systems, hosting a repository to my GitHub page. I will continue to host these notes but in a more generalised manner since leaving NOC.
These notes are written in markdown
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top30.pdf The most useful basic Unix commands!
A useful file mounter for accessing your server files from home!
This is a package of python modules, like your toolboxes in Matlab. Recommended to use!
- Ipythonnotebooks or the new Jupyter notebooks
These are a web based GUI for developing python scripts. You can add markdown comments (the same way I have written this wiki) and Latex maths to explain your code. It has inline plotting, terminal access and use bash commands. These notebooks can be transferred into a normal python script with the click of a button and give you access to your scripts from any computer with VPN and a web browser!
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Some starting information: Setting up and getting started
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Some advance tips for conda and notebooks. Including virtual environments
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Common Error messages A few tips for users of Ipython Notebooks. E.g.Once you've learnt python and set up a notebook server, you might want to set up your own environment rather than the default one. As well as debugging
If you swap to bash here's a .bashrc to get you started
Useful commands I've found and want to remember!
The NetCDF Operators are invaluable tools for quick manipulation of NetCDF files. Here I add a list of commands I use and want for reference! Perhaps a good starting point!
ncview allows you to view NetCDF files!
How to set up online git hub repository, Free private repositories for students!
Parallel MPI runs on Mobilis
Small analysis jobs on one core
Run a series of jobs automatically etc
Dr Maike Sonnewald kindly provided her latex master template for the correct to the guidelines PhD Thesis for Southampton university!