chore(dev): add cerebro config

esteinig · Feb 16, 2025 · 9e1686f · 9e1686f
1 parent 259e48b
commit 9e1686f
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Showing 3 changed files with 5 additions and 5 deletions.
diff --git a/lib/resources/conda/scrubby.yml b/lib/resources/conda/scrubby.yml
@@ -4,4 +4,4 @@ channels:
   - conda-forge        
   - bioconda    
 dependencies:
-  - scrubby=1.0.1
+  - scrubby
diff --git a/lib/resources/conda/vircov.yml b/lib/resources/conda/vircov.yml
@@ -4,4 +4,4 @@ channels:
   - conda-forge        
   - bioconda    
 dependencies:
-  - vircov=0.9.1
+  - vircov
diff --git a/nextflow.config b/nextflow.config
@@ -474,7 +474,7 @@ process {
 
     withLabel: cerebro { 
       cpus = params.resources.threads.cerebro 
-      // conda = params.resources.conda.cerebro // dev version
+      conda = params.resources.conda.cerebro // dev version
     }
     withLabel: panviralVirusRecovery { 
       cpus = params.resources.threads.vircov 
@@ -487,11 +487,11 @@ process {
     }
     withLabel: qualityReadScan { 
       cpus = params.resources.threads.cerebro 
-      // conda = params.resources.conda.cerebro // dev version
+      conda = params.resources.conda.cerebro // dev version
     }
     withLabel: qualityDeduplication { 
       cpus = params.resources.threads.cerebro 
-      // conda = params.resources.conda.cerebro // dev version
+      conda = params.resources.conda.cerebro // dev version
     }
     withLabel: qualityReadQualityFastp { 
       cpus = params.resources.threads.fastp