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print BLAST check output
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eead-csic-compbio committed Nov 14, 2024
1 parent 85137dc commit 13850cc
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4 changes: 2 additions & 2 deletions install.pl
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# Script that checks/compiles software required by get_homologues[-est] and
# checks dependencies for first-time users.
# last checked Aug2024
# last checked Nov2024

use strict;
use warnings;
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$output = `$ENV{'EXE_BLASTP'} 2>&1`;
if(!$output || $output !~ /BLAST/)
{
die "<< Cannot run shipped blastp, please download it from $BLASTEXEPATH ,\n".
die "<< Cannot run shipped blastp ($output), please download it from $BLASTEXEPATH ,\n".

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Use of uninitialized value $output in concatenation (.) or string
"<< install it and edit variable BLAST_PATH as explained in the manual\n".
"<< (inside set_phyTools_env in file lib/phyTools.pm) .\n".
"<< Then re-run\n";
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