Merge pull request #7 from czbiohub-sf/no-negativity

set cov b to 0 too
czbiohub-sf · Sep 25, 2024 · 9787e96 · 9787e96
2 parents acdd399 + c692b24
commit 9787e96
Showing 1 changed file with 3 additions and 1 deletion.
diff --git a/stats_utils/compensator.py b/stats_utils/compensator.py
@@ -78,7 +78,9 @@ def __init__(
 
             m, b, cov_m, cov_b = self._get_fit_metrics(compensation_csv_dir)
             # ignore negative b
-            b = 0.0 if b < 0 else b
+            if b < 0:
+                b = 0
+                cov_b = 0
 
         inv_cmatrix = self._get_matrix(m, b)
         inv_cmatrix_std = self._get_matrix_std(cov_m, cov_b)