add metadata json file

.Rbuildignore

@@ -6,3 +6,4 @@
 ^docs$
 ^pkgdown$
 ^\.github$
+^codemeta\.json$

codemeta.json

@@ -0,0 +1,220 @@
+{
+  "@context": "https://doi.org/10.5063/schema/codemeta-2.0",
+  "@type": "SoftwareSourceCode",
+  "identifier": "hdmax2",
+  "description": "This package allows users to estimate the indirect effects of mediators, calculate the overall indirect effect of mediators, and facilitates the execution of high-dimensional mediation analysis. The HDMAX2 method includes unobserved confounding factors through a latent factor mixed model approach. It supports the use of exposures of various types and the consideration of both continuous and binary outcomes.",
+  "name": "hdmax2: R package hdmax2 performs high dimension mediation analysis",
+  "codeRepository": "https://github.com/bcm-uga/hdmax2",
+  "license": "https://spdx.org/licenses/GPL-3.0",
+  "version": "2.0.0.9000",
+  "programmingLanguage": {
+    "@type": "ComputerLanguage",
+    "name": "R",
+    "url": "https://r-project.org"
+  },
+  "runtimePlatform": "R version 4.3.1 (2023-06-16)",
+  "author": [
+    {
+      "@type": "Person",
+      "givenName": "Florence",
+      "familyName": "Pittion",
+      "email": "florence.pittion@univ-grenoble-alpes.fr"
+    },
+    {
+      "@type": "Person",
+      "givenName": "Magali",
+      "familyName": "Richard",
+      "email": "magali.richard@univ-grenoble-alpes.fr"
+    },
+    {
+      "@type": "Person",
+      "givenName": "Olivier",
+      "familyName": "Francois",
+      "email": "olivier.francois@univ-grenoble-alpes.fr"
+    },
+    {
+      "@type": "Person",
+      "givenName": "Basile",
+      "familyName": "Jumentier",
+      "email": "basile.jumentier@gmail.com"
+    }
+  ],
+  "contributor": [
+    {
+      "@type": "Person",
+      "givenName": "Magali",
+      "familyName": "Richard",
+      "email": "magali.richard@univ-grenoble-alpes.fr"
+    },
+    {
+      "@type": "Person",
+      "givenName": "Olivier",
+      "familyName": "Francois",
+      "email": "olivier.francois@univ-grenoble-alpes.fr"
+    }
+  ],
+  "maintainer": [
+    {
+      "@type": "Person",
+      "givenName": "Florence",
+      "familyName": "Pittion",
+      "email": "florence.pittion@univ-grenoble-alpes.fr"
+    }
+  ],
+  "softwareSuggestions": [
+    {
+      "@type": "SoftwareApplication",
+      "identifier": "knitr",
+      "name": "knitr",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=knitr"
+    },
+    {
+      "@type": "SoftwareApplication",
+      "identifier": "rmarkdown",
+      "name": "rmarkdown",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=rmarkdown"
+    }
+  ],
+  "softwareRequirements": {
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+      "@type": "SoftwareApplication",
+      "identifier": "mltools",
+      "name": "mltools",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=mltools"
+    },
+    "2": {
+      "@type": "SoftwareApplication",
+      "identifier": "ggplot2",
+      "name": "ggplot2",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=ggplot2"
+    },
+    "3": {
+      "@type": "SoftwareApplication",
+      "identifier": "survival",
+      "name": "survival",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=survival"
+    },
+    "4": {
+      "@type": "SoftwareApplication",
+      "identifier": "dplyr",
+      "name": "dplyr",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=dplyr"
+    },
+    "5": {
+      "@type": "SoftwareApplication",
+      "identifier": "mediation",
+      "name": "mediation",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=mediation"
+    },
+    "6": {
+      "@type": "SoftwareApplication",
+      "identifier": "stats",
+      "name": "stats"
+    },
+    "7": {
+      "@type": "SoftwareApplication",
+      "identifier": "utils",
+      "name": "utils"
+    },
+    "8": {
+      "@type": "SoftwareApplication",
+      "identifier": "data.table",
+      "name": "data.table",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=data.table"
+    },
+    "9": {
+      "@type": "SoftwareApplication",
+      "identifier": "Biostrings",
+      "name": "Biostrings",
+      "provider": {
+        "@id": "https://www.bioconductor.org",
+        "@type": "Organization",
+        "name": "Bioconductor",
+        "url": "https://www.bioconductor.org"
+      },
+      "sameAs": "https://bioconductor.org/packages/release/bioc/html/Biostrings.html"
+    },
+    "10": {
+      "@type": "SoftwareApplication",
+      "identifier": "IRanges",
+      "name": "IRanges",
+      "provider": {
+        "@id": "https://www.bioconductor.org",
+        "@type": "Organization",
+        "name": "Bioconductor",
+        "url": "https://www.bioconductor.org"
+      },
+      "sameAs": "https://bioconductor.org/packages/release/bioc/html/IRanges.html"
+    },
+    "11": {
+      "@type": "SoftwareApplication",
+      "identifier": "gridExtra",
+      "name": "gridExtra",
+      "provider": {
+        "@id": "https://cran.r-project.org",
+        "@type": "Organization",
+        "name": "Comprehensive R Archive Network (CRAN)",
+        "url": "https://cran.r-project.org"
+      },
+      "sameAs": "https://CRAN.R-project.org/package=gridExtra"
+    },
+    "12": {
+      "@type": "SoftwareApplication",
+      "identifier": "R",
+      "name": "R",
+      "version": ">= 2.10"
+    },
+    "SystemRequirements": null
+  },
+  "fileSize": "850.17KB",
+  "relatedLink": "https://bcm-uga.github.io/hdmax2/",
+  "readme": "https://github.com/bcm-uga/hdmax2/blob/main/README.md"
+}