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Update renv and rerender
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arnold-c committed Apr 21, 2024
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15 changes: 15 additions & 0 deletions _freeze/journal-articles/execute-results/html.json
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"markdown": "---\nbibliography: files/arnold-c.bib\nformat:\n html\n---\n\n::: {.cell}\n\n```{.r .cell-code}\nlibrary(tidyverse)\n```\n\n::: {.cell-output .cell-output-stderr}\n\n```\n── Attaching core tidyverse packages ──────────────────────── tidyverse 2.0.0 ──\n✔ dplyr 1.1.2 ✔ readr 2.1.4\n✔ forcats 1.0.0 ✔ stringr 1.5.0\n✔ ggplot2 3.4.2 ✔ tibble 3.2.1\n✔ lubridate 1.9.2 ✔ tidyr 1.3.0\n✔ purrr 1.0.2 \n── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──\n✖ dplyr::filter() masks stats::filter()\n✖ dplyr::lag() masks stats::lag()\nℹ Use the conflicted package (<http://conflicted.r-lib.org/>) to force all conflicts to become errors\n```\n\n\n:::\n\n```{.r .cell-code}\nggplot(mtcars, aes(x = wt, y = mpg)) +\n geom_point()\n```\n\n::: {.cell-output-display}\n![](journal-articles_files/figure-html/unnamed-chunk-1-1.png){width=672}\n:::\n:::\n\n<!-- ```{r} -->\n<!-- #| output: asis -->\n<!-- read.bibtex(\"files/arnold-c.bib\") -->\n<!-- ``` -->\n\n\n---\nnocite: |\n @*\n---\n\n\n@arnoldLongitudinalStudyImpact2022a\n",
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15 changes: 15 additions & 0 deletions _freeze/posters/execute-results/html.json
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"markdown": "---\noutput: 'asis'\n---\n\n\n## Posters\n\n\n\n```{.r .cell-code}\nlibrary(knitcitations)\ncleanbib()\nread.bibtex(\"references.bib\")\n```\n\n[1] J. Marrero, A. García, M. Berrocoso, et al. \"Strategies for the\ndevelopment of volcanic hazard maps in monogenetic volcanic fields: the\nexample of La Palma (Canary Islands)\". In: _Journal of Applied\nVolcanology_ 8 (Jul. 2019). DOI: 10.1186/s13617-019-0085-5.\n",
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15 changes: 15 additions & 0 deletions _freeze/publications/execute-results/html.json
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"markdown": "---\nexecute:\n echo: false\n message: false\n warning: false\nformat:\n html:\n toc: false\n---\n\n::: {.cell}\n\n:::\n\n\n:::{#refs .refs}\n\nBolotin, S., S. L. Hughes, R. D. Savage, E. McLachlan, A. Severini, C.\nArnold, S. Richardson, N. S. Crowcroft, S. Deek, S. A. Halperin, et al.\n(2023). \"Maternal Varicella Antibodies in Children Aged Less than One\nYear: Assessment of Antibody Decay\". In: _PLOS ONE_ 18.11, p. e0287765.\nISSN: 1932-6203. DOI: 10.1371/journal.pone.0287765.\n<https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0287765>\n(visited on Apr. 20, 2024).\n\nWright, J., M. Science, S. Osman, C. Arnold, M. Sumaida, N. Crowcroft,\nS. L. Deeks, K. Brown, S. Halperin, T. Hatchette, et al. (2023).\n\"Uptake of Pertussis Immunization in Pregnancy and Determinants of\nVaccination in Toronto, Canada\". In: _Vaccine_. ISSN: 0264-410X. DOI:\n10.1016/j.vaccine.2023.10.020.\n<https://www.sciencedirect.com/science/article/pii/S0264410X23011921>\n(visited on Oct. 16, 2023).\n\nArnold, C., S. Srinivasan, S. Rodriguez, N. Rydzak, C. M. Herzog, A.\nGontu, N. Bharti, M. Small, C. J. Rogers, M. M. Schade, et al. (2022).\n\"A Longitudinal Study of the Impact of University Student Return to\nCampus on the SARS-CoV-2 Seroprevalence among the Community Members\".\nIn: _Scientific Reports_ 12.1, p. 8586. ISSN: 2045-2322. DOI:\n10.1038/s41598-022-12499-5.\n<https://doi.org/10.1038/s41598-022-12499-5>.\n\nFernquest, S., A. Palmer, C. Pereira, C. Arnold, E. Hirons, J.\nBroomfield, S. Newman, and S. Glyn-Jones (2020). \"The Response of Hip\nJoint Cartilage to Exercise in Children: An MRI Study Using\nT2-Mapping\". In: _CARTILAGE_. doi: 10.1177/1947603520931182, p.\n1947603520931182. ISSN: 1947-6035. DOI: 10.1177/1947603520931182.\n<https://doi.org/10.1177/1947603520931182> (visited on Jun. 18, 2020).\n\nHan, M. A., D. Storman, H. Al-Rammahy, S. Tang, Q. Hao, G. Leung, M.\nKandi, R. Moradi, J. J. Bartoszko, C. Arnold, et al. (2020). \"Impact of\nMaternal Reproductive Factors on Cancer Risks of Offspring: A\nSystematic Review and Meta-Analysis of Cohort Studies\". In: _PLOS ONE_\n15.3, p. e0230721. ISSN: 1932-6203. DOI: 10.1371/journal.pone.0230721.\n<https://journals.plos.org/plosone/article?id=10.1371/journal.pone.0230721>.\n\nCraig, R., E. Kunkel, N. S. Crowcroft, M. C. Fitzpatrick, H. de Melker,\nB. M. Althouse, T. Merkel, S. V. Scarpino, K. Koelle, L. Friedman, et\nal. (2019). \"Asymptomatic Infection and Transmission of Pertussis in\nHouseholds: A Systematic Review\". In: _Clinical Infectious Diseases_\n(ciz531). ISSN: 1058-4838. DOI: 10.1093/cid/ciz531.\n<https://doi.org/10.1093/cid/ciz531>.\n\nScience, M., R. Savage, A. Severini, E. McLachlan, S. L. Hughes, C.\nArnold, S. Richardson, N. Crowcroft, S. Deeks, S. Halperin, et al.\n(2019). \"Measles Antibody Levels in Young Infants\". In: _Pediatrics_,\np. e20190630. DOI: 10.1542/peds.2019-0630.\n<http://pediatrics.aappublications.org/content/early/2019/11/19/peds.2019-0630.abstract>.\n\nFernquest, S., C. Arnold, A. Palmer, J. Broomfield, J. Denton, A.\nTaylor, and S. Glyn-Jones (2017). \"Osseous Impingement Occurs Early in\nFlexion in Cam-Type Femoroacetabular Impingement\". In: _The Bone &\nJoint Journal_ 99-B (4\\_Supple\\_B), pp. 41-48. ISSN: 2049-4394. DOI:\n10.1302/0301-620X.99B4.BJJ-2016-1274.R1.\n<https://online.boneandjoint.org.uk/doi/full/10.1302/0301-620X.99B4.BJJ-2016-1274.R1>.\n\n:::\n",
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35 changes: 16 additions & 19 deletions renv.lock
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