update codecov settings

OxfordIHTM · Apr 28, 2024 · 138544c · 138544c
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diff --git a/.github/workflows/test-coverage.yaml b/.github/workflows/test-coverage.yaml
@@ -13,6 +13,7 @@ jobs:
     runs-on: ubuntu-latest
     env:
       GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }}
+      CODECOV_TOKEN: ${{ secrets.CODECOV_TOKEN }}
 
     steps:
       - uses: actions/checkout@v4

diff --git a/README.Rmd b/README.Rmd
@@ -20,6 +20,7 @@ knitr::opts_chunk$set(
 [![Lifecycle: experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](https://lifecycle.r-lib.org/articles/stages.html#experimental)
 [![R-CMD-check](https://github.com/OxfordIHTM/codeditr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/OxfordIHTM/codeditr/actions/workflows/R-CMD-check.yaml)
 [![Codecov test coverage](https://codecov.io/gh/OxfordIHTM/codeditr/branch/main/graph/badge.svg)](https://app.codecov.io/gh/OxfordIHTM/codeditr?branch=main)
+[![CodeFactor](https://www.codefactor.io/repository/github/OxfordIHTM/codeditr/badge)](https://www.codefactor.io/repository/github/OxfordIHTM/codeditr)
 <!-- badges: end -->
 
 The [World Health Organization](https://www.who.int/)'s [CoDEdit electronic tool](https://www.who.int/standards/classifications/classification-of-diseases/services/codedit-tool) is intended to help producers of cause-of-death statistics in strengthening their capacity to perform routine checks on their data. This package ports the original tool built using Microsoft Access into R so as to leverage the utility and function of the original tool into a usable application program interface that can be used for building more universal tools or for creating programmatic scientific workflows aimed at routine, automated, and large-scale monitoring of cause-of-death data.

diff --git a/README.md b/README.md
@@ -13,6 +13,7 @@ experimental](https://img.shields.io/badge/lifecycle-experimental-orange.svg)](h
 [![R-CMD-check](https://github.com/OxfordIHTM/codeditr/actions/workflows/R-CMD-check.yaml/badge.svg)](https://github.com/OxfordIHTM/codeditr/actions/workflows/R-CMD-check.yaml)
 [![Codecov test
 coverage](https://codecov.io/gh/OxfordIHTM/codeditr/branch/main/graph/badge.svg)](https://app.codecov.io/gh/OxfordIHTM/codeditr?branch=main)
+[![CodeFactor](https://www.codefactor.io/repository/github/OxfordIHTM/codeditr/badge)](https://www.codefactor.io/repository/github/OxfordIHTM/codeditr)
 <!-- badges: end -->
 
 The [World Health Organization](https://www.who.int/)’s [CoDEdit
@@ -69,17 +70,17 @@ follows:
 
 ``` r
 citation("codeditr")
-#> To cite zscorer in publications use:
+#> To cite codeditr in publications use:
 #> 
-#>   Anita Makori and Ernest Guevarra (2024). codeditr: Implementing Basic
-#>   Checks on Cause-of-Death Data Based on World Health Organization's
-#>   CoDEdit Tool. R package version 0.0.9000. URL
-#>   https://oxford-ihtm.io/codeditr/
+#>   Anita Makori, Ernest Guevarra (2024). _codeditr: Implementing
+#>   Cause-of-Death Data Checks Based on World Health Organization's
+#>   CoDEdit Tool_. R package version 0.0.9000,
+#>   <https://oxford-ihtm.io/codeditr/>.
 #> 
 #> A BibTeX entry for LaTeX users is
 #> 
 #>   @Manual{,
-#>     title = {codeditr: Implementing Basic Checks on Cause-of-Death Data Based on World Health Organization's CoDEdit Tool},
+#>     title = {codeditr: Implementing Cause-of-Death Data Checks Based on World Health Organization's CoDEdit Tool},
 #>     author = {{Anita Makori} and {Ernest Guevarra}},
 #>     year = {2024},
 #>     note = {R package version 0.0.9000},