Skip to content

Commit

Permalink
Update fhir-analytics example
Browse files Browse the repository at this point in the history 
Change admin password to "admin"
Add init bundle to load Questionnaire
  • Loading branch information
@rublag-hs
rublag-hs committed Jan 31, 2025
1 parent c65f81f commit 33a9c6f
Show file tree
Hide file tree
Showing 2 changed files with 358 additions and 1 deletion.
5 changes: 4 additions & 1 deletion fhir-analytics/docker-compose.yaml
View file
Original file line number Diff line number Diff line change
Expand Up @@ -17,10 +17,13 @@ services:
pull_policy: always
depends_on:
- aidbox-db
volumes:
- ./resources:/resources
ports:
- 8080:8080
environment:
AIDBOX_ADMIN_PASSWORD: password
BOX_INIT_BUNDLE: 'file:///resources/init-bundle.json'
AIDBOX_ADMIN_PASSWORD: admin
AIDBOX_CLIENT_SECRET: secret
AIDBOX_COMPLIANCE: enabled
AIDBOX_CORRECT_AIDBOX_FORMAT: true
Expand Down
354 changes: 354 additions & 0 deletions fhir-analytics/resources/init-bundle.json
View file
Original file line number Diff line number Diff line change
@@ -0,0 +1,354 @@
{
"type": "batch",
"entry": [
{
"resource": {
"resourceType": "Questionnaire",
"title": "CVD Reference Form",
"id": "cvd-reference-form",
"status": "draft",
"url": "http://forms.aidbox.io/questionnaire/cvd-form",
"item": [
{
"item": [
{
"text": "Given",
"type": "string",
"linkId": "kG70nh3M",
"extension": [
{
"url": "http://aidbox.io/questionnaire-itemColumnSize",
"valueInteger": 4
}
]
},
{
"text": "Family",
"type": "string",
"linkId": "kpiXBdPU",
"extension": [
{
"url": "http://aidbox.io/questionnaire-itemColumnSize",
"valueInteger": 4
}
]
},
{
"text": "Gender",
"type": "choice",
"linkId": "Jw_kMVir",
"extension": [
{
"url": "http://aidbox.io/questionnaire-itemColumnSize",
"valueInteger": 4
}
],
"answerOption": [
{
"valueCoding": {
"code": "male",
"display": "Male"
}
},
{
"valueCoding": {
"code": "female",
"display": "Female"
}
}
]
}
],
"text": "Patient",
"type": "group",
"linkId": "Zicv0gIs"
},
{
"item": [
{
"text": "Height",
"type": "quantity",
"linkId": "height",
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/questionnaire-unitOption",
"valueCoding": {
"display": "cm"
}
}
]
},
{
"text": "Weight",
"type": "quantity",
"linkId": "weight",
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/questionnaire-unitOption",
"valueCoding": {
"display": "kg"
}
}
]
},
{
"code": [
{
"code": "60621009",
"system": "http://snomed.info/sct",
"display": "Body Mass Index "
}
],
"item": [
{
"text": "BMI=[Wt(kg) / Ht(cm) / Ht(cm)] * 10000",
"type": "display",
"linkId": "S1FZst5d",
"extension": [
{
"url": "http://hl7.org/fhir/StructureDefinition/questionnaire-itemControl",
"valueCodeableConcept": {
"coding": [
{
"code": "help"
}
]
}
}
]
}
],
"text": "BMI",
"type": "decimal",
"linkId": "Bx4DZWYr",
"readOnly": true,
"extension": [
{
"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-calculatedExpression",
"valueExpression": {
"language": "text/fhirpath",
"expression": "(%resource.repeat(item).where(linkId='weight').answer.value.value / \n%resource.repeat(item).where(linkId='height').answer.value.value.power(2)) * 10000"
}
},
{
"url": "http://hl7.org/fhir/StructureDefinition/maxValue",
"valueDecimal": 4
},
{
"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
"valueBoolean": true
},
{
"url": "http://aidbox.io/questionnaire-itemColumnSize",
"valueInteger": 10
}
]
},
{
"text": "Obesity",
"type": "boolean",
"linkId": "zZvgjBlR",
"readOnly": true,
"extension": [
{
"url": "http://aidbox.io/questionnaire-itemColumnSize",
"valueInteger": 2
},
{
"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-calculatedExpression",
"valueExpression": {
"language": "text/fhirpath",
"expression": "%resource.repeat(item).where(linkId='Bx4DZWYr').answer.value > 25.0"
}
}
]
}
],
"text": "Obesity",
"type": "group",
"linkId": "N6IfpJcM"
},
{
"code": [
{
"code": "365981007",
"system": "http://snomed.info/sct",
"display": "Tobacco smoking behavior - finding"
}
],
"text": "Smoking Status",
"type": "choice",
"linkId": "m17jd1Yn",
"extension": [
{
"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
"valueBoolean": true
}
],
"answerOption": [
{
"valueCoding": {
"code": "266919005",
"system": "http://snomed.info/sct",
"display": "Never smoked tobacco"
}
},
{
"valueCoding": {
"code": "77176002",
"system": "http://snomed.info/sct",
"display": "Smoker"
}
},
{
"valueCoding": {
"code": "43381005",
"system": "http://snomed.info/sct",
"display": "Passive smoker"
}
},
{
"valueCoding": {
"code": "160617001",
"system": "http://snomed.info/sct",
"display": "Stopped smoking"
}
}
]
},
{
"text": "Alcohol Intake",
"type": "choice",
"linkId": "mBMblYF9",
"answerOption": [
{
"valueCoding": {
"code": "never-consumed",
"display": "Never Consumed"
}
},
{
"valueCoding": {
"code": "yes",
"display": "Yes"
}
}
]
},
{
"item": [
{
"code": [
{
"code": "719848005",
"system": "http://snomed.info/sct",
"display": "Disorder caused by alcohol"
}
],
"text": "In the past 6 months had 5 drinks in a row",
"type": "choice",
"linkId": "Ua0r9Pmh",
"extension": [
{
"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
"valueBoolean": true
}
],
"enableWhen": [
{
"answerCoding": {
"code": "male",
"display": "Male"
},
"operator": "=",
"question": "Jw_kMVir"
}
],
"answerOption": [
{
"valueCoding": {
"code": "373066001",
"system": "http://snomed.info/sct",
"display": "Yes"
}
},
{
"valueCoding": {
"code": "373067005",
"system": "http://snomed.info/sct",
"display": "No"
}
}
],
"enableBehavior": "all"
},
{
"code": [
{
"code": "719848005",
"system": "http://snomed.info/sct",
"display": "Disorder caused by alcohol"
}
],
"text": "In the past 6 months had 4 drinks in a row",
"type": "choice",
"linkId": "8nvUb8xC",
"extension": [
{
"url": "http://hl7.org/fhir/uv/sdc/StructureDefinition/sdc-questionnaire-observationExtract",
"valueBoolean": true
}
],
"enableWhen": [
{
"answerCoding": {
"code": "female",
"display": "Female"
},
"operator": "=",
"question": "Jw_kMVir"
}
],
"answerOption": [
{
"valueCoding": {
"code": "373066001",
"system": "http://snomed.info/sct",
"display": "Yes"
}
},
{
"valueCoding": {
"code": "373067005",
"system": "http://snomed.info/sct",
"display": "No"
}
}
],
"enableBehavior": "all"
}
],
"text": "Excessive Alcohol Intake",
"type": "group",
"linkId": "qyIwVBRd",
"enableWhen": [
{
"answerCoding": {
"code": "yes",
"display": "Yes"
},
"operator": "=",
"question": "mBMblYF9"
}
],
"enableBehavior": "all"
}
]
},
"request": {
"method": "PUT",
"url": "/Questionnaire/cvd-reference-form"
}
}
]
}

0 comments on commit 33a9c6f

Please sign in to comment.