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dependencies-ubuntu17.md

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Dependencies for Ubuntu 17.10 or lower

These installation instructions are tested from Ubuntu 16.04 to Ubuntu 17.10 running on many machines. Do not run Pupil on a VM unless you know what you are doing. We recommend using Ubuntu 18.04 LTS though as the setup is much easier! See the corresponding setup guide for Ubuntu 18.04.

General Setup

Pupil requires Python 3.6 or higher. Please check this resource on how to install Python 3.6 on your version of Ubuntu.

sudo apt-get update
sudo apt install -y pkg-config git cmake build-essential nasm wget python3-setuptools libusb-1.0-0-dev  python3-dev python3-pip python3-numpy python3-scipy libglew-dev libglfw3-dev libtbb-dev

ffmpeg3

Install ffmpeg3 from jonathonf's ppa:

sudo add-apt-repository ppa:jonathonf/ffmpeg-4
sudo apt-get update
sudo apt install -y libavformat-dev libavcodec-dev libavdevice-dev libavutil-dev libswscale-dev libavresample-dev ffmpeg libav-tools x264 x265 libportaudio2 portaudio19-dev

OpenCV

You will need to install OpenCV from source:

NOTE: Opencv needs to following requirements set up correctly for being able to build correctly! If you don't have these set up correctly, you might be able to build OpenCV, but experience errors when trying to use it with Pupil!

  1. python3 interpreter can be found
  2. libpython***.so shared lib can be found (make sure to install python3-dev)
  3. numpy for python3 is installed

If everything is set up correctly, run the following commands in the terminal:

git clone https://github.com/opencv/opencv
cd opencv
mkdir build
cd build
cmake -DCMAKE_BUILD_TYPE=RELEASE -DWITH_TBB=ON -DWITH_CUDA=OFF -DBUILD_opencv_python2=OFF -DBUILD_opencv_python3=ON ..
make -j2
sudo make install
sudo ldconfig

NOTE: OpenCV is not able to build Python 2 and Python 3 modules at the same time. OpenCV will build the Python 2 module by default if requirements for both versions are met. Setting the Python 2 Numpy include directory to an empty string effectively disables the Python 2 module build.

OpenCV Troubleshooting

The following errors were commonly reported:

  • ImportError: No module named 'cv2'

    When you see this error, Python cannot find the bindings from your OpenCV installation.

    We do NOT (!) recommend to install opencv-python via pip in that case!

    Installing opencv-python will install another full (potentially different) version of opencv to your machine, so we are not recommending this setup. When you compile opencv with -DBUILD_opencv_python3=ON as we advise above, you should have the cv2 package available for import in Python as this will install compatible Python bindings already.

    However, you might run into these problems when using a virtual environment, as your virtual environment cannot by default access Python packages that were installed from apt. In that case there are 2 options:

    1. Symlink or copy the Python bindings into your virtualenv. See e.g. step 4 of this stackoverflow post for reference.
    2. Create your virtualenv with the --system-site-packages option, which will enable access to system-installed Python packages.

    If you are still experiencing this issue, delete the OpenCV build folder, recheck the requirements and build and try again.

  • ImportError: */detector_2d.*.so: undefined symbol: *ellipse*InputOutputArray*RotatedRect*Scalar*

    This error appears if opencv has been installed previously via apt-get.

    • Remove all opencv installations that were installed via apt-get.
    • Delete the *.so files as well as the build dirctory within the pupil_detectors directory.
    • Start Pupil Capture. This should trigger a recompilation of the detector modules.

Turbojpeg

wget -O libjpeg-turbo.tar.gz https://sourceforge.net/projects/libjpeg-turbo/files/1.5.1/libjpeg-turbo-1.5.1.tar.gz/download
tar xvzf libjpeg-turbo.tar.gz
cd libjpeg-turbo-1.5.1
./configure --enable-static=no --prefix=/usr/local
sudo make install
sudo ldconfig

Custom Version of libusb for 200hz cameras

This is ONLY required if you are using 200hz cameras. Otherwise it can be ignored!

  1. Build or download fixed binary from release: https://github.com/pupil-labs/libusb/releases/tag/v1.0.21-rc6-fixes
  2. Replace system libusb-1.0.so.0 with this binary.

libuvc

git clone https://github.com/pupil-labs/libuvc
cd libuvc
mkdir build
cd build
cmake ..
make && sudo make install

If you want to run libuvc as normal user, add the following udev rules:

echo 'SUBSYSTEM=="usb",  ENV{DEVTYPE}=="usb_device", GROUP="plugdev", MODE="0664"' | sudo tee /etc/udev/rules.d/10-libuvc.rules > /dev/null
sudo udevadm trigger

3D Eye Model Dependencies

sudo apt install -y libgoogle-glog-dev libatlas-base-dev libeigen3-dev

Ceres

You will need to build Ceres from source:

sudo add-apt-repository ppa:bzindovic/suitesparse-bugfix-1319687
sudo apt-get update
sudo apt-get install libsuitesparse-dev

If add-apt-repository is not found, install the following package first:

sudo apt-get install software-properties-common

The build and install the Ceres solver:

git clone https://ceres-solver.googlesource.com/ceres-solver
cd ceres-solver
mkdir build && cd build
cmake .. -DBUILD_SHARED_LIBS=ON
make -j3
make test
sudo make install
sudo sh -c 'echo "/usr/local/lib" > /etc/ld.so.conf.d/ceres.conf'
sudo ldconfig

Install Python Libraries

We recommend using a virtual environment for running Pupil.

# Upgrade pip to latest version. This is necessary for some dependencies.
python -m pip install --upgrade pip

pip install cysignals
pip install cython
pip install msgpack==0.5.6
pip install numexpr
pip install packaging
pip install psutil
pip install pyaudio
pip install pyopengl
pip install pyzmq
pip install scipy
pip install git+https://github.com/zeromq/pyre

pip install pupil-apriltags
pip install pupil-detectors
pip install git+https://github.com/pupil-labs/PyAV
pip install git+https://github.com/pupil-labs/pyuvc
pip install git+https://github.com/pupil-labs/pyndsi
pip install git+https://github.com/pupil-labs/pyglui

NOTE: If you get the error ImportError: No module named 'cv2' when trying to run Pupil, please refer to the section OpenCV Troubleshooting above.

Next Steps

That's it! You're done installing dependencies!

Now, you should be able to run Pupil from source. Follow the remaining instructions in the README.