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Releases: ucl-cssb/MIMIC

MIMIC v1.0.0 – Code Snapshot for Bioinformatics Application Note Submission

04 Apr 13:48
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v1.0.0
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MIMIC v1.0.0 – Code Snapshot for Bioinformatics Application Note Submission Latest
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This release represents the code snapshot for MIMIC—the Python package for simulating, inferring, and predicting microbial community interactions and dynamics—that was used for the Bioinformatics Application Note submission.

Key Features Included in This Release:

  • Simulation modules supporting gLV, VAR, and CR models

  • Data imputation using Gaussian Process regression

  • Inference modules leveraging both Bayesian and linear methods

  • Comprehensive documentation and example workflows

Notes for Users:

  • This release corresponds to the version used in the application note currently under review for publication in Bioinformatics.

  • Future updates and improvements will continue on the main branch: https://github.com/ucl-cssb/MIMIC

  • For citation, please refer to the DOI provided by Zenodo once the publication is finalized.

License: MIT
Repository: https://github.com/ucl-cssb/MIMIC

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