From a126a7254e1a05e9a14fb87535759f1fae45b859 Mon Sep 17 00:00:00 2001
From: Kyle Burton <burtonk@uchicago.edu>
Date: Thu, 6 Feb 2025 10:04:52 -0600
Subject: [PATCH] Updating ACCESS-backend and sheepdog

---
 .secrets.baseline                             |  9 +-
 .../manifest.json                             | 86 +------------------
 2 files changed, 3 insertions(+), 92 deletions(-)

diff --git a/.secrets.baseline b/.secrets.baseline
index 0e3c659f60..41625b852a 100644
--- a/.secrets.baseline
+++ b/.secrets.baseline
@@ -9394,13 +9394,6 @@
         "hashed_secret": "ca253d1c9dece2da0d6fb24ded7bdb849a475966",
         "is_verified": false,
         "line_number": 98
-      },
-      {
-        "type": "Secret Keyword",
-        "filename": "staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json",
-        "hashed_secret": "7120244dce59930b75711144fda4b1f6d78e4865",
-        "is_verified": false,
-        "line_number": 208
       }
     ],
     "staging.midrc.org/manifest.json": [
@@ -9565,5 +9558,5 @@
       }
     ]
   },
-  "generated_at": "2025-01-28T15:39:53Z"
+  "generated_at": "2025-02-06T16:04:51Z"
 }
diff --git a/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json b/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json
index d1a18ad0e6..f3e031bf8c 100644
--- a/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json
+++ b/staging.gen3.biodatacatalyst.nhlbi.nih.gov/manifest.json
@@ -7,7 +7,7 @@
     "autodeploy": "yes"
   },
   "versions": {
-    "access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:2025.01",
+    "access-backend": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/access-backend:1.6.0",
     "arborist": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/arborist:2025.01",
     "audit-service": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/audit-service:2025.01",
     "awshelper": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/awshelper:2025.01",
@@ -17,7 +17,7 @@
     "indexd": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/indexd:2025.01",
     "peregrine": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/peregrine:2025.01",
     "revproxy": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/nginx:2025.01",
-    "sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:2025.01",
+    "sheepdog": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/sheepdog:5.2.0",
     "metadata": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/metadata-service:2025.01",
     "portal": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/data-portal:2025.01",
     "fluentd": "fluent/fluentd-kubernetes-daemonset:v1.15.3-debian-cloudwatch-1.0",
@@ -169,88 +169,6 @@
         }
       ],
       "restart_policy": "Never"
-    },
-    {
-      "name": "manifest-indexing",
-      "action": "index-object-manifest",
-      "activeDeadlineSeconds": 86400,
-      "serviceAccountName": "jobs-staging-gen3-biodatacatalyst-nhlbi-nih-gov",
-      "container": {
-        "name": "job-task",
-        "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/manifest-indexing:2025.01",
-        "pull_policy": "Always",
-        "env": [
-          {
-            "name": "GEN3_HOSTNAME",
-            "valueFrom": {
-              "configMapKeyRef": {
-                "name": "manifest-global",
-                "key": "hostname"
-              }
-            }
-          }
-        ],
-        "volumeMounts": [
-          {
-            "name": "sower-jobs-creds-volume",
-            "readOnly": true,
-            "mountPath": "/creds.json",
-            "subPath": "creds.json"
-          }
-        ],
-        "cpu-limit": "1",
-        "memory-limit": "1Gi"
-      },
-      "volumes": [
-        {
-          "name": "sower-jobs-creds-volume",
-          "secret": {
-            "secretName": "sower-jobs-g3auto"
-          }
-        }
-      ],
-      "restart_policy": "Never"
-    },
-    {
-      "name": "indexd-manifest",
-      "action": "download-indexd-manifest",
-      "activeDeadlineSeconds": 86400,
-      "serviceAccountName": "jobs-preprod-gen3-biodatacatalyst-nhlbi-nih-gov",
-      "container": {
-        "name": "job-task",
-        "image": "707767160287.dkr.ecr.us-east-1.amazonaws.com/gen3/download-indexd-manifest:2025.01",
-        "pull_policy": "Always",
-        "env": [
-          {
-            "name": "GEN3_HOSTNAME",
-            "valueFrom": {
-              "configMapKeyRef": {
-                "name": "manifest-global",
-                "key": "hostname"
-              }
-            }
-          }
-        ],
-        "volumeMounts": [
-          {
-            "name": "sower-jobs-creds-volume",
-            "readOnly": true,
-            "mountPath": "/creds.json",
-            "subPath": "creds.json"
-          }
-        ],
-        "cpu-limit": "1",
-        "memory-limit": "1Gi"
-      },
-      "volumes": [
-        {
-          "name": "sower-jobs-creds-volume",
-          "secret": {
-            "secretName": "sower-jobs-g3auto"
-          }
-        }
-      ],
-      "restart_policy": "Never"
     }
   ],
   "global": {