dynverse / dynmethods Star 123 Code Issues Pull requests A collection of 50+ trajectory inference methods within a common interface 📥📤 bioinformatics-algorithms single-cell-rna-seq single-cell-analysis trajectory-inference-methods trajectory-inference pseudotemporal-ordering Updated Dec 21, 2023 R
dynverse / dynverse Star 74 Code Issues Pull requests A set of tools supporting the development, execution, and benchmarking of trajectory inference methods. 🌍 benchmarking scrna-seq single-cell single-cell-rna-seq single-cell-omics trajectory-inference-methods Updated May 20, 2021 R
KChen-lab / Cyclum Star 21 Code Issues Pull requests Identify circular trajectories in scRNA-seq data using an autoencoder with sinusoidal activations single-cell-rna-seq artifical-neural-network trajectory-inference-methods latent-process-inference Updated Dec 17, 2021 Python