list-of-resources-of-interest-on-Interaction-Data.md

List of Resources of Interest on Interaction Data

We will list here links to websites, projects, documents related to Interaction Data

Projects

• IABIN Pollinators Thematic Network
• Global Biotic Interactions (GloBI)
• TAXREF associated knowledge database list (see in ## Used lists)
• Natural History Museum Interaction Bank
• Web of Life
• BioInfo.org.uk
• Mangal.io
• GoMexSI
• KelpForest
• Africa Tree Database
• FishBase
• SealifeBase
• NOAA REEM
• DAPSTOM
• ICES
• Avian Diet Database
• Ecological-Database-of-the-World-s-Insect-Pathogens
• US National Parasite Collection
• Database of trophic interactions

Documents (papers, theses, webpages, etc)

• GloBI data sources: https://globalbioticinteractions.org/sources
• GloBI blog post covers some of the many ways folks share their data: https://www.globalbioticinteractions.org/2018/08/16/models-in-fashion/
• The Relations Ontology (RO) captures many species interaction terms (e.g., purl.obolibrary.org/obo/RO_0002455)

Used Lists

• France: Predation Herbivoria Parasitism (generic term) with precise terms endoparasite, ectoparasite and parasitoid Mutualism (generic term) with precise terms pollination and dispersion Symbiosis Commensalism

  Relations Ontology has a variety of interaction terms. See https://github.com/oborel/obo-relations. Examples include, but are not limited to, eats and pollinates. Language translations for terms are supported.