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Machine learning project module#746

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elaboy wants to merge 80 commits intosmith-chem-wisc:mastersmith-chem-wisc/mzLib:masterfrom elaboy:MachineLearningProjectModuleelaboy/mzLib-Fork:MachineLearningProjectModuleCopy head branch name to clipboard

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Commits on Nov 18, 2021

• correct Within calculation

  

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• update unit tests

  

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Commits on Feb 4, 2022

• conflicts resolved back to upstream

  

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Commits on Feb 15, 2022

• Merge remote-tracking branch 'upstream/master'

  

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Commits on Feb 17, 2022

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Commits on Feb 18, 2022

• this is the spot

  

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Commits on Feb 25, 2022

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Commits on Mar 9, 2022

• Merge branch 'master' of https://github.com/trishorts/mzLib

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Commits on Mar 16, 2022

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Commits on Apr 13, 2022

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• Merge branch 'master' of https://github.com/trishorts/mzLib

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Commits on Jun 1, 2022

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Commits on Jun 14, 2022

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• Merge branch 'master' of https://github.com/trishorts/mzLib

  

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Commits on Jul 6, 2022

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Commits on Jul 27, 2022

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• Merge branch 'master' of https://github.com/trishorts/mzLib

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Commits on Sep 11, 2022

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• Merge branch 'master' of https://github.com/trishorts/mzLib

  

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Commits on Sep 27, 2022

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Commits on Oct 4, 2022

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Commits on Jan 30, 2023

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Commits on Mar 15, 2023

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Commits on Apr 24, 2023

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Commits on Jun 29, 2023

• Merge remote-tracking branch 'upstream/master'

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• add space

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Commits on Oct 10, 2023

• Merge remote-tracking branch 'upstream/master'

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Commits on Nov 6, 2023

• first move

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• psmFromTsv unit tests

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• moved library spectrum

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• empty unit test for library spectrum

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• m

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Commits on Nov 7, 2023

• library spectrum unit tests

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• lib spec unit tests

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• PSMTSV unit tests

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• add tests for variants and localized glycans

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• capitalization convention

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• read internal ions test

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• uncomment lines

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Commits on Nov 8, 2023

• moved fragmentation and library spectrum to new project Omics

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Commits on Nov 9, 2023

• Revert "moved fragmentation and library spectrum to new project Omics"

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• someInterfaces

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• good midpont

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• omics classes and interfaces seem tobe working

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Commits on Nov 10, 2023

• move LibrarySpectrum class to Omics. Create SpectrumMatchFromTsvHeader interface in Omics

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Commits on Nov 15, 2023

• not working

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• Fixed up the PR

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Commits on Nov 16, 2023

• Merge pull request smith-chem-wisc#2 from trishorts/tempPsmFromTsv

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• fix broken test

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• some unit tests

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• dhg

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• Expanded test coverage on file classes

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Commits on Nov 20, 2023

• new header and xlink psmtsv reader unit tests

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• CPU(windows, linux, and mac) dll

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Commits on Nov 21, 2023

• init

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• Merge branch 'pr/737' into TrainingMethodsForChronologer

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• Custom Datasets and training functions

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• cool progress

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Commits on Nov 22, 2023

• training working

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Commits on Nov 24, 2023

• Working

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Commits on Nov 27, 2023

• training working

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• MachineLearningProject/Abstraction

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Commits on Nov 28, 2023

• Abstraction Progress

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• Chronologer model might be done

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• some tests

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Commits on Nov 30, 2023

• Before clean up

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• removing unused files

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• CPU

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• Merge branch 'master' into MachineLearningProjectModule

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• Revert "Merge branch 'master' into MachineLearningProjectModule"

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• Update Test.csproj

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Commits on Dec 4, 2023

• Update TestChronologer.cs

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Commits on Dec 7, 2023

• fixed conflicts

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• nuspec changed

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Commits on Dec 8, 2023

• Merge remote-tracking branch 'upstream/master' into MachineLearningProjectModule

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Commits on Dec 11, 2023

• added unimod xml file for modification loading in the machine learning project

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• Class rename and diagram

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