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35 followers · 19 following
  • International Institute of Molecular and Cell BIology
  • Warsaw, Poland

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Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: StarstruckAchievement: Pull Shark

Achievements

Achievement: YOLOAchievement: Arctic Code Vault ContributorAchievement: StarstruckAchievement: Pull Shark

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  1. LINE_1_RACE_seq_analysis Public

    Scripts and data used during the analysis of LINE-1 RACE seq tail-seq output, for the publication "Uridilation by TUT4/7 restricts retrotransposition of human LINE-1"s (Warkocki et al 2018, Cell, a…

    R 5 2

  2. PlasFlow Public

    Software for prediction of plasmid sequences in metagenomic assemblies

    Python 101 28

  3. biostrext Public

    Extension to Biostrings R package

    R

  4. scripts Public

    various scripts used in routine bioinfo work

    Shell

  5. nanotail Public

    R package for visualization and exploratory analysis of Oxford Nanopore direct RNA seq based polyA predictions

    R 10 5

176 contributions in the last year

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Activity overview

Contributed to smaegol/testpage, smaegol/nanotail, nanoporetech/dorado and 5 other repositories
Loading A graph representing smaegol's contributions from April 21, 2024 to April 24, 2025. The contributions are 95% commits, 3% issues, 1% pull requests, 1% code review.

Contribution activity

April 2025

Created 1 repository

Created a pull request in nanoporetech/dorado that received 3 comments

Additional options for poly(A) lengths

Two simple additions: reporting of polyA boundaries in raw signal, as requested in #1235 reporting of polyA lengths (and signal boundaries) in dor…

+79 −10 lines changed • 3 comments
Reviewed 1 pull request in 1 repository
nanoporetech/dorado 1 pull request
8 contributions in private repositories Apr 2 – Apr 22
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