DicomViewer GUI (Dicom Viewer)

3D Dicom Viewer

Main Window

3D processing

포함하는 기능은 다음과 같습니다.

• Load DICOM stack
• Save slice (axial, sagittal, coronal)
• Colormap transform
• Slider scrolling
• Mouse hovering/clicking
• Show DICOM info
• Show slice index coordinate
• 3D volume reconstruction

How to use it?

Project root will be /src, just clone it and run mainwindow.py.

python run mainwindow.py

Load Checkpoint in work_dir/LiteMedSAM

base checkpoint(from bowang-lab/MedSAM) https://drive.google.com/drive/folders/1ETWmi4AiniJeWOt6HAsYgTjYv_fkgzoN checkpoint 저장 Fine Tuned Checkpoint (https://drive.google.com/drive/folders/1h0RgLM06RTMNbeLLVMD5opFw4kuaFNnG?usp=drive_link)

Strictly follow the package version in requirements.txt is not necessary.

Acknowledgments

• Dicom Viewer reconstruction modified from wenyalintw's Repo
• MedSAM from Bowang-lab(https://github.com/bowang-lab/MedSAM)

INFINITT HealthCare (2024)

SNU CREATIVE INTEGRATED DESIGN 2 (2024), Hana Oh, Jimin Seo, Jahyun Yun