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Merge branch 'branch-25.04' into add-medical-img-examples
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madsbk authored Feb 17, 2025
2 parents 2808485 + ecb81c2 commit 79df558
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6 changes: 3 additions & 3 deletions .devcontainer/cuda11.8-conda/devcontainer.json
Original file line number Diff line number Diff line change
Expand Up @@ -5,17 +5,17 @@
"args": {
"CUDA": "11.8",
"PYTHON_PACKAGE_MANAGER": "conda",
"BASE": "rapidsai/devcontainers:25.02-cpp-cuda11.8-mambaforge-ubuntu22.04"
"BASE": "rapidsai/devcontainers:25.04-cpp-cuda11.8-mambaforge-ubuntu22.04"
}
},
"runArgs": [
"--rm",
"--name",
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.02-cuda11.8-conda"
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.04-cuda11.8-conda"
],
"hostRequirements": {"gpu": "optional"},
"features": {
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.2": {}
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.4": {}
},
"overrideFeatureInstallOrder": [
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils"
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6 changes: 3 additions & 3 deletions .devcontainer/cuda11.8-pip/devcontainer.json
Original file line number Diff line number Diff line change
Expand Up @@ -5,17 +5,17 @@
"args": {
"CUDA": "11.8",
"PYTHON_PACKAGE_MANAGER": "pip",
"BASE": "rapidsai/devcontainers:25.02-cpp-cuda11.8-ubuntu22.04"
"BASE": "rapidsai/devcontainers:25.04-cpp-cuda11.8-ubuntu22.04"
}
},
"runArgs": [
"--rm",
"--name",
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.02-cuda11.8-pip"
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.04-cuda11.8-pip"
],
"hostRequirements": {"gpu": "optional"},
"features": {
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.2": {}
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.4": {}
},
"overrideFeatureInstallOrder": [
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils"
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6 changes: 3 additions & 3 deletions .devcontainer/cuda12.8-conda/devcontainer.json
Original file line number Diff line number Diff line change
Expand Up @@ -5,17 +5,17 @@
"args": {
"CUDA": "12.8",
"PYTHON_PACKAGE_MANAGER": "conda",
"BASE": "rapidsai/devcontainers:25.02-cpp-mambaforge-ubuntu22.04"
"BASE": "rapidsai/devcontainers:25.04-cpp-mambaforge-ubuntu22.04"
}
},
"runArgs": [
"--rm",
"--name",
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.02-cuda12.8-conda"
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.04-cuda12.8-conda"
],
"hostRequirements": {"gpu": "optional"},
"features": {
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.2": {}
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.4": {}
},
"overrideFeatureInstallOrder": [
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils"
Expand Down
6 changes: 3 additions & 3 deletions .devcontainer/cuda12.8-pip/devcontainer.json
Original file line number Diff line number Diff line change
Expand Up @@ -5,17 +5,17 @@
"args": {
"CUDA": "12.8",
"PYTHON_PACKAGE_MANAGER": "pip",
"BASE": "rapidsai/devcontainers:25.02-cpp-cuda12.8-ubuntu22.04"
"BASE": "rapidsai/devcontainers:25.04-cpp-cuda12.8-ubuntu22.04"
}
},
"runArgs": [
"--rm",
"--name",
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.02-cuda12.8-pip"
"${localEnv:USER:anon}-rapids-${localWorkspaceFolderBasename}-25.04-cuda12.8-pip"
],
"hostRequirements": {"gpu": "optional"},
"features": {
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.2": {}
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils:25.4": {}
},
"overrideFeatureInstallOrder": [
"ghcr.io/rapidsai/devcontainers/features/rapids-build-utils"
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18 changes: 9 additions & 9 deletions .github/workflows/build.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -28,7 +28,7 @@ concurrency:
jobs:
cpp-build:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-build.yaml@branch-25.04
with:
build_type: ${{ inputs.build_type || 'branch' }}
branch: ${{ inputs.branch }}
Expand All @@ -37,7 +37,7 @@ jobs:
python-build:
needs: [cpp-build]
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-python-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-python-build.yaml@branch-25.04
with:
build_type: ${{ inputs.build_type || 'branch' }}
branch: ${{ inputs.branch }}
Expand All @@ -46,7 +46,7 @@ jobs:
upload-conda:
needs: [cpp-build, python-build]
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-upload-packages.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-upload-packages.yaml@branch-25.04
with:
build_type: ${{ inputs.build_type || 'branch' }}
branch: ${{ inputs.branch }}
Expand All @@ -56,19 +56,19 @@ jobs:
if: github.ref_type == 'branch'
needs: python-build
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.04
with:
arch: "amd64"
branch: ${{ inputs.branch }}
build_type: ${{ inputs.build_type || 'branch' }}
container_image: "rapidsai/ci-conda:latest"
date: ${{ inputs.date }}
node_type: "gpu-v100-latest-1"
node_type: "gpu-l4-latest-1"
run_script: "ci/build_docs.sh"
sha: ${{ inputs.sha }}
wheel-build-cpp:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.04
with:
matrix_filter: group_by([.ARCH, (.CUDA_VER|split(".")|map(tonumber)|.[0])]) | map(max_by(.PY_VER|split(".")|map(tonumber)))
build_type: ${{ inputs.build_type || 'branch' }}
Expand All @@ -79,7 +79,7 @@ jobs:
wheel-build-python:
needs: wheel-build-cpp
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.04
with:
build_type: ${{ inputs.build_type || 'branch' }}
branch: ${{ inputs.branch }}
Expand All @@ -89,7 +89,7 @@ jobs:
wheel-publish-cpp:
needs: wheel-build-cpp
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-publish.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-publish.yaml@branch-25.04
with:
build_type: ${{ inputs.build_type || 'branch' }}
branch: ${{ inputs.branch }}
Expand All @@ -100,7 +100,7 @@ jobs:
wheel-publish-python:
needs: wheel-build-python
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-publish.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-publish.yaml@branch-25.04
with:
build_type: ${{ inputs.build_type || 'branch' }}
branch: ${{ inputs.branch }}
Expand Down
56 changes: 41 additions & 15 deletions .github/workflows/pr.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -25,8 +25,9 @@ jobs:
- wheel-cpp-build
- wheel-python-build
- wheel-python-tests
- telemetry-setup
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/pr-builder.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/pr-builder.yaml@branch-25.04
if: always()
with:
needs: ${{ toJSON(needs) }}
Expand All @@ -35,6 +36,7 @@ jobs:
# provides at least Python 3.11 (see
# https://docs.python.org/3/library/datetime.html#datetime.date.fromisoformat)
runs-on: ubuntu-24.04
needs: telemetry-setup
env:
RAPIDS_GH_TOKEN: ${{ secrets.GITHUB_TOKEN }}
steps:
Expand All @@ -44,7 +46,7 @@ jobs:
repo: kvikio
changed-files:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/changed-files.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/changed-files.yaml@branch-25.04
with:
files_yaml: |
test_cpp:
Expand All @@ -70,58 +72,73 @@ jobs:
- '!README.md'
- '!docs/**'
- '!notebooks/**'
telemetry-setup:
runs-on: ubuntu-latest
continue-on-error: true
env:
OTEL_SERVICE_NAME: "pr-kvikio"
steps:
- name: Telemetry setup
# This gate is here and not at the job level because we need the job to not be skipped,
# since other jobs depend on it.
if: ${{ vars.TELEMETRY_ENABLED == 'true' }}
uses: rapidsai/shared-actions/telemetry-dispatch-stash-base-env-vars@main
checks:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/checks.yaml@branch-25.02
needs: telemetry-setup
uses: rapidsai/shared-workflows/.github/workflows/checks.yaml@branch-25.04
with:
ignored_pr_jobs: telemetry-summarize
conda-cpp-build:
needs: checks
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-build.yaml@branch-25.04
with:
build_type: pull-request
conda-cpp-tests:
needs: [conda-cpp-build, changed-files]
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-tests.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-tests.yaml@branch-25.04
if: fromJSON(needs.changed-files.outputs.changed_file_groups).test_cpp
with:
build_type: pull-request
conda-java-tests:
needs: conda-cpp-build
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.04
with:
build_type: pull-request
node_type: "gpu-v100-latest-1"
node_type: "gpu-l4-latest-1"
arch: "amd64"
container_image: "rapidsai/ci-conda:latest"
run_script: "ci/test_java.sh"
conda-python-build:
needs: conda-cpp-build
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-python-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-python-build.yaml@branch-25.04
with:
build_type: pull-request
conda-python-tests:
needs: [conda-python-build, changed-files]
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-python-tests.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-python-tests.yaml@branch-25.04
if: fromJSON(needs.changed-files.outputs.changed_file_groups).test_python
with:
build_type: pull-request
docs-build:
needs: conda-python-build
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.04
with:
build_type: pull-request
node_type: "gpu-v100-latest-1"
node_type: "gpu-l4-latest-1"
arch: "amd64"
container_image: "rapidsai/ci-conda:latest"
run_script: "ci/build_docs.sh"
devcontainer:
needs: telemetry-setup
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/build-in-devcontainer.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/build-in-devcontainer.yaml@branch-25.04
with:
arch: '["amd64"]'
cuda: '["12.8"]'
Expand All @@ -132,23 +149,32 @@ jobs:
sccache -s;
wheel-cpp-build:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.04
with:
matrix_filter: group_by([.ARCH, (.CUDA_VER|split(".")|map(tonumber)|.[0])]) | map(max_by(.PY_VER|split(".")|map(tonumber)))
build_type: pull-request
script: ci/build_wheel_cpp.sh
wheel-python-build:
needs: wheel-cpp-build
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-build.yaml@branch-25.04
with:
build_type: pull-request
script: ci/build_wheel_python.sh
wheel-python-tests:
needs: [wheel-python-build, changed-files]
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/wheels-test.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/wheels-test.yaml@branch-25.04
if: fromJSON(needs.changed-files.outputs.changed_file_groups).test_python
with:
build_type: pull-request
script: ci/test_wheel.sh
telemetry-summarize:
# This job must use a self-hosted runner to record telemetry traces.
runs-on: linux-amd64-cpu4
needs: pr-builder
if: ${{ vars.TELEMETRY_ENABLED == 'true' && !cancelled() }}
continue-on-error: true
steps:
- name: Telemetry summarize
uses: rapidsai/shared-actions/telemetry-dispatch-summarize@main
17 changes: 10 additions & 7 deletions .github/workflows/test.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,33 +12,36 @@ on:
sha:
required: true
type: string
build_type:
type: string
default: nightly

jobs:
cpp-tests:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-tests.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-cpp-tests.yaml@branch-25.04
with:
build_type: nightly
build_type: ${{ inputs.build_type }}
branch: ${{ inputs.branch }}
date: ${{ inputs.date }}
sha: ${{ inputs.sha }}
python-tests:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/conda-python-tests.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/conda-python-tests.yaml@branch-25.04
with:
build_type: nightly
build_type: ${{ inputs.build_type }}
branch: ${{ inputs.branch }}
date: ${{ inputs.date }}
sha: ${{ inputs.sha }}
conda-java-tests:
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/custom-job.yaml@branch-25.04
with:
build_type: nightly
build_type: ${{ inputs.build_type }}
branch: ${{ inputs.branch }}
date: ${{ inputs.date }}
sha: ${{ inputs.sha }}
node_type: "gpu-v100-latest-1"
node_type: "gpu-l4-latest-1"
arch: "amd64"
container_image: "rapidsai/ci-conda:latest"
run_script: "ci/test_java.sh"
2 changes: 1 addition & 1 deletion .github/workflows/trigger-breaking-change-alert.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -12,7 +12,7 @@ jobs:
trigger-notifier:
if: contains(github.event.pull_request.labels.*.name, 'breaking')
secrets: inherit
uses: rapidsai/shared-workflows/.github/workflows/breaking-change-alert.yaml@branch-25.02
uses: rapidsai/shared-workflows/.github/workflows/breaking-change-alert.yaml@branch-25.04
with:
sender_login: ${{ github.event.sender.login }}
sender_avatar: ${{ github.event.sender.avatar_url }}
Expand Down
7 changes: 7 additions & 0 deletions .pre-commit-config.yaml
Original file line number Diff line number Diff line change
Expand Up @@ -108,6 +108,13 @@ repos:
hooks:
- id: rapids-dependency-file-generator
args: ["--clean"]
- repo: https://github.com/shellcheck-py/shellcheck-py
rev: v0.10.0.1
hooks:
- id: shellcheck
args: ["--severity=warning"]
files: ^ci/


default_language_version:
python: python3
2 changes: 1 addition & 1 deletion VERSION
Original file line number Diff line number Diff line change
@@ -1 +1 @@
25.02.00
25.04.00
4 changes: 2 additions & 2 deletions ci/build_cpp.sh
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
#!/bin/bash
# Copyright (c) 2023-2024, NVIDIA CORPORATION.
# Copyright (c) 2023-2025, NVIDIA CORPORATION.

set -euo pipefail

Expand All @@ -18,7 +18,7 @@ conda config --set path_conflict prevent

sccache --zero-stats

rapids-conda-retry mambabuild conda/recipes/libkvikio
RAPIDS_PACKAGE_VERSION=$(rapids-generate-version) rapids-conda-retry mambabuild conda/recipes/libkvikio

sccache --show-adv-stats

Expand Down
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