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Provide Variable initialization from np.full for Datasets #16074

Provide Variable initialization from np.full for Datasets

Provide Variable initialization from np.full for Datasets #16074

Triggered via pull request January 23, 2025 15:17
Status Failure
Total duration 21m 1s
Artifacts 12

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2 errors and 150 warnings
windows-latest py3.10: xarray\tests\test_backends.py#L6383
test_zarr_region_chunk_partial_offset[2] PermissionError: [Errno 13] Permission denied: 'C:\\Users\\runneradmin\\AppData\\Local\\Temp\\pytest-of-runneradmin\\pytest-0\\popen-gw1\\test_zarr_region_chunk_partial1\\foo.zarr\\foo/1'
windows-latest py3.10
Process completed with exit code 1.
detect ci trigger
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
Event File
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10 bare-minimum
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10 bare-minimum: xarray/namedarray/core.py#L264
Duplicate dimension names present: dimensions {'x'} appear more than once in dims=('x', 'x'). We do not yet support duplicate dimension names, but we do allow initial construction of the object. We recommend you rename the dims immediately to become distinct, as most xarray functionality is likely to fail silently if you do not. To rename the dimensions you will need to set the ``.dims`` attribute of each variable, ``e.g. var.dims=('x0', 'x1')``.
ubuntu-latest py3.10 bare-minimum: xarray/namedarray/core.py#L264
Duplicate dimension names present: dimensions {'x'} appear more than once in dims=('x', 'x'). We do not yet support duplicate dimension names, but we do allow initial construction of the object. We recommend you rename the dims immediately to become distinct, as most xarray functionality is likely to fail silently if you do not. To rename the dimensions you will need to set the ``.dims`` attribute of each variable, ``e.g. var.dims=('x0', 'x1')``.
ubuntu-latest py3.10 bare-minimum
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 bare-minimum
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 bare-minimum
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.12 flaky
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.12 flaky
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='5e04546b-1a6e-413c-9547-f5d0fca5dda2'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='5e04546b-1a6e-413c-9547-f5d0fca5dda2'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='fdc9dc65-9c1e-46c4-aa94-423eb1e30230'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='e9b1edb5-92be-42e0-a6f7-7304f4f00e7d'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='fdc9dc65-9c1e-46c4-aa94-423eb1e30230'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'netCDF4._netCDF4.Dataset'>, '/tmp/pytest-of-runner/pytest-0/popen-gw3/test_download_from_github_load0/xarray_tutorial_data/4c5c606840191d085ac934c9665f7387-tiny.nc', mode='r', kwargs={'clobber': True, 'diskless': False, 'persist': False, 'format': 'NETCDF4'}, manager_id='e9b1edb5-92be-42e0-a6f7-7304f4f00e7d'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/pydap/handlers/dap.py#L123
PyDAP was unable to determine the DAP protocol defaulting to DAP2 which is consider legacy and may result in slower responses. For more, see go to https://www.opendap.org/faq-page.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/pydap/handlers/dap.py#L123
PyDAP was unable to determine the DAP protocol defaulting to DAP2 which is consider legacy and may result in slower responses. For more, see go to https://www.opendap.org/faq-page.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/bs4/builder/_lxml.py#L124
The 'strip_cdata' option of HTMLParser() has never done anything and will eventually be removed.
ubuntu-latest py3.12 flaky: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/bs4/builder/_lxml.py#L124
The 'strip_cdata' option of HTMLParser() has never done anything and will eventually be removed.
ubuntu-latest py3.12 flaky
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 flaky
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
macos-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.10
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
macos-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x1451631c0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='8a1f3b15-72d7-4981-85ac-09fb3bc2834f'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x143555d50>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='8314c325-2619-4aab-9d8b-df792e6e5c92'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x1451631c0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='8a1f3b15-72d7-4981-85ac-09fb3bc2834f'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x143555d50>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='8314c325-2619-4aab-9d8b-df792e6e5c92'), but file is not already closed. This may indicate a bug.
macos-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
macos-latest py3.10: Users/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.11 all-but-dask
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.11 all-but-dask
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.11 all-but-dask
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask: home/runner/micromamba/envs/xarray-tests/lib/python3.11/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
ubuntu-latest py3.11 all-but-dask
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10 min-all-deps
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps: xarray/coding/variables.py#L348
NumPy will stop allowing conversion of out-of-bound Python integers to integer arrays. The conversion of 255 to int8 will fail in the future. For the old behavior, usually: np.array(value).astype(dtype)` will give the desired result (the cast overflows).
ubuntu-latest py3.10 min-all-deps
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.12 all-but-numba
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.12 all-but-numba
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12 all-but-numba
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var1 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at dim2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var3 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at numbers is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at time is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at dim3 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var1 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at dim2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at var2 is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12 all-but-numba
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x133d0e340> Traceback (most recent call last): File "/Users/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/var/folders/2s/h6hvv9ps03xgz_krkkstvq_r0000gn/T/tmp3zbp6y2y/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='94f2f5d7-9ec0-423a-9015-d6ec2a84cbec'), but file is not already closed. This may indicate a bug.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x133d0e340> Traceback (most recent call last): File "/Users/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/var/folders/2s/h6hvv9ps03xgz_krkkstvq_r0000gn/T/tmp3zbp6y2y/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='94f2f5d7-9ec0-423a-9015-d6ec2a84cbec'), but file is not already closed. This may indicate a bug.
macos-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.12: Users/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/api/asynchronous.py#L197
Consolidated metadata is currently not part in the Zarr format 3 specification. It may not be supported by other zarr implementations and may change in the future.
macos-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
macos-latest py3.12
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
macos-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f15a6ad8100>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='c65eef91-dfe0-43da-bf13-4a0bc899c3aa'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f15baaa0dc0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='d9a7b5d5-e430-4820-8371-8083f07b7c04'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f15a6ad8100>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='c65eef91-dfe0-43da-bf13-4a0bc899c3aa'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/_pytest/python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x7f15baaa0dc0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='d9a7b5d5-e430-4820-8371-8083f07b7c04'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.10: home/runner/micromamba/envs/xarray-tests/lib/python3.10/site-packages/zarr/_storage/store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
ubuntu-latest py3.10
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
ubuntu-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12
ubuntu-latest pipelines will use ubuntu-24.04 soon. For more details, see https://github.com/actions/runner-images/issues/10636
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x7f553d0e6160> Traceback (most recent call last): File "/home/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/tmp/tmpv8qjjadk/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='2dcb9041-60f7-4465-9a4f-b14e98b07426'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/_pytest/unraisableexception.py#L85
Exception ignored in: <function CachingFileManager.__del__ at 0x7f553d0e6160> Traceback (most recent call last): File "/home/runner/work/xarray/xarray/xarray/backends/file_manager.py", line 255, in __del__ warnings.warn( RuntimeWarning: deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <_io.BufferedReader name='/tmp/tmpv8qjjadk/temp-67.nc'>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='2dcb9041-60f7-4465-9a4f-b14e98b07426'), but file is not already closed. This may indicate a bug.
ubuntu-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.12: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12: home/runner/micromamba/envs/xarray-tests/lib/python3.12/site-packages/zarr/core/group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
ubuntu-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
ubuntu-latest py3.12
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x000001E532E70610>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='913567b4-f9d6-4d95-af8b-f14428bfe75e'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x000001E52EEAD7E0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='5797fe65-b915-430d-96a4-4c47713c1b17'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x000001E532E70610>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='913567b4-f9d6-4d95-af8b-f14428bfe75e'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\_pytest\python.py#L159
deallocating CachingFileManager(<class 'h5netcdf.core.File'>, <fsspec.implementations.local.LocalFileOpener object at 0x000001E52EEAD7E0>, mode='r', kwargs={'invalid_netcdf': None, 'decode_vlen_strings': True, 'driver': None}, manager_id='5797fe65-b915-430d-96a4-4c47713c1b17'), but file is not already closed. This may indicate a bug.
windows-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
windows-latest py3.10: xarray/core/duck_array_ops.py#L234
invalid value encountered in cast
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\zarr\_storage\store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
windows-latest py3.10: C:\Users\runneradmin\micromamba\envs\xarray-tests\lib\site-packages\zarr\_storage\store.py#L39
The experimental Zarr V3 implementation in this version of Zarr-Python is not in alignment with the final V3 specification. This version will be removed in Zarr-Python 3 in favor of a spec compliant version.
windows-latest py3.10
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at x is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12: C:\Users\runneradmin\micromamba\envs\xarray-tests\Lib\site-packages\zarr\core\group.py#L2824
Object at foo is not recognized as a component of a Zarr hierarchy.
windows-latest py3.12
Input 'save-always' has been deprecated with message: save-always does not work as intended and will be removed in a future release. A separate `actions/cache/restore` step should be used instead. See https://github.com/actions/cache/tree/main/save#always-save-cache for more details.
windows-latest py3.12
Unexpected input(s) 'file', valid inputs are ['binary', 'codecov_yml_path', 'commit_parent', 'directory', 'disable_file_fixes', 'disable_search', 'disable_safe_directory', 'dry_run', 'env_vars', 'exclude', 'fail_ci_if_error', 'files', 'flags', 'git_service', 'gcov_args', 'gcov_executable', 'gcov_ignore', 'gcov_include', 'handle_no_reports_found', 'job_code', 'name', 'network_filter', 'network_prefix', 'os', 'override_branch', 'override_build', 'override_build_url', 'override_commit', 'override_pr', 'plugins', 'report_code', 'report_type', 'root_dir', 'skip_validation', 'slug', 'swift_project', 'token', 'url', 'use_legacy_upload_endpoint', 'use_oidc', 'verbose', 'version', 'working-directory']

Artifacts

Produced during runtime
Name Size
Event File
4.15 KB
Test results for Linux-3.10
157 KB
Test results for Linux-3.10 bare-minimum
137 KB
Test results for Linux-3.10 min-all-deps
178 KB
Test results for Linux-3.11 all-but-dask
184 KB
Test results for Linux-3.12
163 KB
Test results for Linux-3.12 all-but-numba
163 KB
Test results for Linux-3.12 flaky
664 Bytes
Test results for Windows-3.10
164 KB
Test results for Windows-3.12
172 KB
Test results for macOS-3.10
160 KB
Test results for macOS-3.12
167 KB