Model selection for PEtab

Create parameter estimation problems for ODE models

Python package for working with PEtab files

Finite difference methods.

Advanced Multilanguage Interface to CVODES and IDAS

A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling

Parameter estimation for dynamical models using high-performance computing, batch and mini-batch optimizers, and dynamic load balancing.

distributed, likelihood-free inference

PEtab visualization tool

PEtab validation web service

Just Another Beautiful progress BAR

python Parameter EStimation TOolbox

This repository is not maintained anymore. Please use: https://github.com/Benchmarking-Initiative/Benchmark-Models-PEtab

PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology

a modeling environment tailored to parameter estimation in dynamical systems