diff --git a/pcds.yaml b/pcds.yaml index d86fdfc7..46bb60e7 100644 --- a/pcds.yaml +++ b/pcds.yaml @@ -1,83 +1,64 @@ -name: pcds-2.0.4 +name: pcds-2.1.0 channels: - pcds-tag - defaults - conda-forge dependencies: - - ansiwrap=0.8.3 - - asteval=0.9.13 - - binaryornot=0.4.4 - - bluesky=1.4.1 - - boltons=18.0.1 - - cf_units=2.0.1 - - cookiecutter=1.6.0 - - curio=0.9 - - databroker=0.11.3 - - doct=1.0.5 - - doctr=1.7.4 - - event-model=1.5.0 - - historydict=1.2.3 - - holoviews=1.10.9 - - jinja2-time=0.2.0 - - lmfit=0.9.11 - - mongoquery=1.1.0 - - netifaces=0.10.7 - - ophyd=1.2.0 - - papermill=0.14.2 - - periodictable=1.5.0 - - pims=0.4.1 - - poyo=0.4.2 - - prettytable=0.7.2 - - pyfiglet=0.7.5 - - pytest-qt=3.2.1 - - slicerator=0.9.8 - - super_state_machine=2.0.2 - - textwrap3=0.9.1 - - tifffile=0.15.1 - - udunits2=2.2.27.6 - - uncertainties=3.0.3 - - versioneer=0.18 - - whichcraft=0.5.2 - alabaster=0.7.12 - anaconda-client=1.7.2 - - arrow=0.12.1 + - ansiwrap=0.8.4 + - arrow=0.13.1 - asn1crypto=0.24.0 - - atomicwrites=1.2.1 + - asteval=0.9.13 + - atomicwrites=1.3.0 - attrs=18.2.0 - babel=2.6.0 - backcall=0.1.0 + - binaryornot=0.4.4 - blas=1.0 - - bleach=3.0.2 - - blosc=1.14.4 - - bokeh=1.0.1 - - boto3=1.9.35 - - botocore=1.12.35 + - bleach=3.1.0 + - blosc=1.15.0 + - bluesky=1.4.1 + - bokeh=1.0.4 + - boltons=19.1.0 + - boto3=1.9.82 + - botocore=1.12.82 - bzip2=1.0.6 - - ca-certificates=2018.03.07 + - ca-certificates=2019.1.23 - cairo=1.14.12 - - certifi=2018.10.15 - - cffi=1.11.5 - - cftime=1.0.2.1 + - caproto=0.2.2 + - certifi=2018.11.29 + - cf_units=2.0.1 + - cffi=1.12.1 + - cftime=1.0.3.4 - chardet=3.0.4 - click=7.0 - - cloudpickle=0.6.1 + - cloudpickle=0.8.0 - clyent=1.2.2 - colorcet=1.0.0 - coloredlogs=10.0 + - cookiecutter=1.6.0 - coverage=4.5.2 - - cryptography=2.3.1 + - cryptography=2.5 + - curio=0.9 - cycler=0.10.0 - cytoolz=0.9.0.1 - - dask=0.20.2 - - dask-core=0.20.2 - - datashader=0.6.6 + - dask=1.1.3 + - dask-core=1.1.3 + - databroker=0.12.1 + - datashader=0.6.9 - datashape=0.5.4 - - dbus=1.13.2 - - decorator=4.3.0 - - distributed=1.24.2 + - dbus=1.13.6 + - decorator=4.3.2 + - distributed=1.26.0 - docopt=0.6.2 + - doct=1.0.5 + - doctr=1.8.0 - docutils=0.14 - - entrypoints=0.2.3 + - elog=0.1.2 + - entrypoints=0.3 + - epics-base=3.14.12.6 + - event-model=1.8.0 - expat=2.2.6 - ffmpeg=4.0 - flake8=3.6.0 @@ -88,195 +69,209 @@ dependencies: - future=0.17.1 - glib=2.56.2 - gmp=6.1.2 - - graphite2=1.3.12 + - graphite2=1.3.13 - graphviz=2.40.1 - gst-plugins-base=1.14.0 - gstreamer=1.14.0 - h5py=2.8.0 + - happi=1.2.1 - harfbuzz=1.8.8 - hdf5=1.10.2 - heapdict=1.0.0 + - historydict=1.2.3 + - holoviews=1.11.2 - humanfriendly=4.17 - humanize=0.5.1 + - hutch-python=1.0.1 + - hxrsnd=0.1.3 - icu=58.2 - - idna=2.7 - - imageio=2.4.1 + - idna=2.8 + - imageio=2.5.0 - imagesize=1.1.0 - - intel-openmp=2019.1 - ipykernel=5.1.0 - ipython=7.1.1 - ipython_genutils=0.2.0 - ipywidgets=7.4.2 - jasper=2.0.14 - - jedi=0.13.1 + - jedi=0.13.3 - jinja2=2.10 + - jinja2-time=0.2.0 - jmespath=0.9.3 - jpeg=9b - jsonschema=2.6.0 - jupyter=1.0.0 - - jupyter_client=5.2.3 + - jupyter_client=5.2.4 - jupyter_console=6.0.0 - jupyter_core=4.4.0 - kiwisolver=1.0.1 - krb5=1.16.1 - - libedit=3.1.20170329 + - krtc=0.1.0 + - libedit=3.1.20181209 - libffi=3.2.1 - libgcc-ng=8.2.0 - libgfortran-ng=7.3.0 - libglu=9.0.0 + - libopenblas=0.3.3 - libopencv=3.4.2 - libopus=1.3 - - libpng=1.6.35 + - libpng=1.6.36 - libsodium=1.0.16 - libstdcxx-ng=8.2.0 - - libtiff=4.0.9 + - libtiff=4.0.10 - libuuid=1.0.3 - libvpx=1.7.0 - libxcb=1.13 - - libxml2=2.9.8 - - libxslt=1.1.32 - - llvmlite=0.25.0 + - libxml2=2.9.9 + - libxslt=1.1.33 + - lightpath=0.5.0 + - llvmlite=0.27.0 + - lmfit=0.9.12 - locket=0.2.0 - - lxml=4.2.5 + - lxml=4.3.1 - lzo=2.10 - - markupsafe=1.1.0 + - markupsafe=1.1.1 - matplotlib=2.2.2 - mccabe=0.6.1 - mistune=0.8.4 - - mkl=2018.0.3 - - mkl_fft=1.0.6 - - mkl_random=1.0.1 - - more-itertools=4.3.0 - - msgpack-python=0.5.6 + - mongoquery=1.1.0 + - more-itertools=5.0.0 + - msgpack-python=0.6.1 - multipledispatch=0.6.0 - mysql=5.5.24 + - mysqlclient=1.3.12 - nbconvert=5.3.1 - nbformat=4.4.0 - ncurses=6.1 + - netifaces=0.10.8 - networkx=2.2 - - notebook=5.7.2 - - numba=0.40.0 + - notebook=5.7.4 + - numba=0.42.0 - numexpr=2.6.8 - numpy=1.14.6 - numpy-base=1.14.6 - olefile=0.46 - opencv=3.4.2 - - openssl=1.0.2p - - packaging=18.0 - - pandas=0.23.4 + - openssl=1.1.1b + - ophyd=1.3.1 + - packaging=19.0 + - pandas=0.24.1 - pandoc=2.2.3.2 - pandocfilters=1.4.2 - pango=1.42.4 - - param=1.8.1 - - parso=0.3.1 + - papermill=0.14.2 + - param=1.8.2 + - parso=0.3.4 - partd=0.3.9 - patsy=0.5.1 + - pcaspy=0.7.1 + - pcdsdaq=2.2.0 + - pcdsdevices=1.2.0 - pcre=8.42 + - periodictable=1.5.0 - pexpect=4.6.0 - pickleshare=0.7.5 - - pillow=5.3.0 - - pip=18.1 - - pixman=0.34.0 - - pluggy=0.8.0 + - pillow=5.4.1 + - pims=0.4.1 + - pip=19.0.3 + - pixman=0.36.0 + - pluggy=0.9.0 + - pmgr=1.1.0 - portaudio=19.6.0 - - prometheus_client=0.4.2 - - prompt_toolkit=2.0.7 - - psutil=5.4.8 + - poyo=0.4.2 + - prettytable=0.7.2 + - prometheus_client=0.6.0 + - prompt_toolkit=2.0.9 + - psdm_qs_cli=0.2.7 + - psutil=5.5.0 + - pswalker=1.0.1 - ptyprocess=0.6.0 - - py=1.7.0 + - py=1.8.0 - py-opencv=3.4.2 - pyaudio=0.2.11 + - pyca=3.0.4 - pycodestyle=2.4.0 - pycparser=2.19 - - pyct=0.4.5 + - pyct=0.4.6 + - pydm=1.6.5 + - pyepics=3.3.0 + - pyfiglet=0.7.5 - pyflakes=2.0.0 - - pygments=2.2.0 + - pygments=2.3.1 - pykerberos=1.1.14 - pymongo=3.7.2 - - pyopenssl=18.0.0 - - pyparsing=2.3.0 + - pyopenssl=19.0.0 + - pyparsing=2.3.1 + - pyqt=5.6.0 - pyqtgraph=0.10.0 - pysocks=1.6.8 - pytables=3.4.4 - pytest=3.10.1 + - pytest-qt=3.2.2 - pytest-timeout=1.3.3 - - python=3.6.6 - - python-dateutil=2.7.5 + - python=3.6.8 + - python-dateutil=2.8.0 - python-graphviz=0.8.4 - - pytz=2018.7 - - pyviz_comms=0.6.0 + - pytz=2018.9 + - pyviz_comms=0.7.0 - pywavelets=1.0.1 - pyyaml=3.13 - - pyzmq=17.1.2 + - pyzmq=18.0.0 + - qdarkstyle=2.5.4 - qt=5.6.3 - - qtawesome=0.5.3 - - qtconsole=4.4.2 - - qtpy=1.5.2 + - qtawesome=0.5.6 + - qtconsole=4.4.3 + - qtpy=1.6.0 - readline=7.0 - - requests=2.20.1 + - requests=2.21.0 - s3transfer=0.1.13 - - scikit-image=0.14.0 - - scipy=1.1.0 + - scikit-image=0.14.1 + - scipy=1.2.1 - seaborn=0.9.0 - send2trash=1.5.0 - - setuptools=40.6.2 + - setuptools=40.8.0 - simplejson=3.16.0 - sip=4.18.1 - - six=1.11.0 + - six=1.12.0 + - slicerator=1.0.0 - snappy=1.1.7 - snowballstemmer=1.2.1 - - sortedcontainers=2.0.5 - - sphinx=1.8.2 + - sortedcontainers=2.1.0 + - sphinx=1.8.4 - sphinx_rtd_theme=0.4.2 - sphinxcontrib=1.0 - sphinxcontrib-websupport=1.1.0 - - sqlite=3.25.3 + - sqlite=3.26.0 - statsmodels=0.9.0 + - super_state_machine=2.0.2 - tblib=1.3.2 - terminado=0.8.1 - testpath=0.4.2 + - textwrap3=0.9.2 + - tifffile=0.15.1 + - timechart=1.2.1 - tk=8.6.8 - toolz=0.9.0 - tornado=4.5.3 - - tqdm=4.28.1 + - tqdm=4.31.1 - traitlets=4.3.2 + - transfocate=0.3.2 + - typhon=0.3.0 - tzlocal=1.5.1 + - udunits2=2.2.27.6 - ujson=1.35 - - urllib3=1.23 + - uncertainties=3.0.3 + - urllib3=1.24.1 + - versioneer=0.18 - wcwidth=0.1.7 - webencodings=0.5.1 - - wheel=0.32.3 + - wheel=0.33.1 + - whichcraft=0.5.2 - widgetsnbextension=3.4.2 - - xarray=0.11.0 + - xarray=0.11.3 - xz=5.2.4 - yaml=0.1.7 - - zeromq=4.2.5 + - zeromq=4.3.1 - zict=0.1.3 - zlib=1.2.11 - - caproto=0.2.0 - - elog=0.1.2 - - epics-base=3.14.12.6 - - happi=1.1.2 - - hutch-python=1.0.0 - - hxrsnd=0.1.2 - - krtc=0.1.0 - - lightpath=0.5.0rc1 - - mysqlclient=1.3.12 - - pcaspy=0.7.1 - - pcdsdaq=2.2.0 - - pcdsdevices=1.1.0 - - pmgr=1.1.0 - - psdm_qs_cli=0.2.7 - - pswalker=1.0.1 - - pyca=3.0.4 - - pydm=1.5.0 - - pyepics=3.3.0 - - pyqt=5.6.0 - - qdarkstyle=2.5.4 - - timechart=1.1.0 - - transfocate=0.3.2 - - typhon=0.2.1 - - pip: - - msgpack==0.5.6 - - tables==3.4.4 -prefix: /reg/neh/home/zlentz/conda/envs/pcds-2.0.4 + - zstd=1.3.7 +prefix: /u1/zlentz/miniconda/envs/pcds-2.1.0 diff --git a/scripts/packages.txt b/scripts/packages.txt index f8ba85b6..62cbab20 100644 --- a/scripts/packages.txt +++ b/scripts/packages.txt @@ -21,6 +21,7 @@ lxml mysqlclient numpy>=1.14 opencv +ophyd>=1.3.1 pandas papermill pcaspy @@ -32,7 +33,7 @@ psdm_qs_cli pswalker pyaudio pyca -pydm<1.6 +pydm pyepics pyfiglet pytables