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@opensafely-core OpenSAFELY Core

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    61 repositories

    • airlock

      Public
      A tool to review & release outputs from an OpenSAFELY backend
      Python
      •
      Other
      •0•2•49•5•Updated Feb 12, 2025Feb 12, 2025

    • r-docker

      Public
      Docker image for running R scripts in OpenSAFELY
      Dockerfile
      •3•1•2•1•Updated Feb 12, 2025Feb 12, 2025

    • pipeline

      Public
      OpenSAFELY Pipeline parsing library
      Python
      •
      Other
      •0•0•8•6•Updated Feb 12, 2025Feb 12, 2025

    • job-runner

      Public
      A client for running jobs in an OpenSAFELY secure environment, requested via job-server (q.v.)
      infrastructure
      Python
      •
      Other
      •5•4•79•7•Updated Feb 11, 2025Feb 11, 2025

    • ehrql

      Public
      ehrQL: the electronic health record query language for OpenSAFELY
      Python
      •
      Other
      •3•7•135•5•Updated Feb 11, 2025Feb 11, 2025

    • repo-template

      Public template
      A template for an OpenSAFELY Core repository
      Just
      •
      Other
      •0•2•6•2•Updated Feb 11, 2025Feb 11, 2025

    • sqlrunner

      Public
      Python
      •
      Other
      •0•1•7•1•Updated Feb 11, 2025Feb 11, 2025

    • opencodelists

      Public
      OpenCodelists is an open platform for creating and sharing codelists of clinical terms and drugs.
      Python
      •
      Other
      •14•53•139•3•Updated Feb 11, 2025Feb 11, 2025

    • job-server

      Public
      A server for mediating jobs that can be run in an OpenSAFELY secure environment. q.v. job-runner
      Python
      •
      Other
      •11•5•123•1•Updated Feb 11, 2025Feb 11, 2025

    • backend-server

      Public
      Infrastructure code for managing partner hosted OpenSAFELY backend servers.
      Shell
      •3•0•16•1•Updated Feb 11, 2025Feb 11, 2025

    • reports

      Public
      Website for viewing OpenSAFELY reports
      Python
      •
      Other
      •0•0•14•3•Updated Feb 11, 2025Feb 11, 2025

    • research-template-docker

      Public
      This provides the devcontainer Docker image used by repos created from the OpenSAFELY research template.
      Shell
      •
      Other
      •0•0•8•1•Updated Feb 11, 2025Feb 11, 2025

    • actions-registry

      Public
      A Django app for the Actions Registry, which lists and displays reusable actions available for studies.
      opensafely
      Python
      •
      Other
      •0•1•4•0•Updated Feb 11, 2025Feb 11, 2025

    • opensafely-cli

      Public
      Command line interface for OpenSAFELY
      Python
      •
      Other
      •1•2•27•2•Updated Feb 6, 2025Feb 6, 2025

    • stata-docker

      Public
      Builds the opensafely stata docker image.
      Stata
      •0•0•4•0•Updated Feb 6, 2025Feb 6, 2025

    • proxy

      Public
      Read-only caching proxy to github.com and ghcr.io.
      Shell
      •1•0•3•1•Updated Feb 6, 2025Feb 6, 2025

    • sysadmin

      Public
      Various scripts and tools for administering OpenSAFELY organisation and infrastructure
      foo
      Python
      •0•0•27•1•Updated Feb 5, 2025Feb 5, 2025

    • research-action

      Public
      A GitHub action for verifying that OpenSAFELY research repos can run correctly
      Python
      •1•0•8•0•Updated Feb 5, 2025Feb 5, 2025

    • interactive-templates

      Public
      Code to generate the reports generated by OpenSAFELY Interactive
      Python
      •
      Other
      •0•0•24•8•Updated Feb 1, 2025Feb 1, 2025

    • opensafely-vscode

      Public
      TypeScript
      •
      MIT License
      •0•0•1•0•Updated Jan 21, 2025Jan 21, 2025

    • opensafely-core.r-universe.dev

      Public
      R packages for inclusion in the opensafely-core r-universe
      Just
      •0•1•0•0•Updated Dec 13, 2024Dec 13, 2024

    • release-hatch

      Public archive
      Small service for serving indexing and local files for viewing, and handling the review process
      Python
      •
      Other
      •1•0•0•9•Updated Nov 7, 2024Nov 7, 2024

    • osrelease

      Public archive
      Tools for reviewing and publishing study outputs safely from the OpenSAFELY platform
      Python
      •0•0•8•0•Updated Nov 7, 2024Nov 7, 2024

    • base-docker

      Public
      Base docker image for OpenSAFELY action containers
      Shell
      •0•0•1•0•Updated Oct 31, 2024Oct 31, 2024

    • job-runner-dependencies

      Public archive
      Bundled dependencies for job-runner
      Python
      •1•0•0•0•Updated Oct 28, 2024Oct 28, 2024

    • osgithub

      Public
      A thin wrapper around the GitHub API for interacting with GitHub repos.
      Python
      •
      Other
      •0•0•3•8•Updated Oct 14, 2024Oct 14, 2024

    • cohort-extractor

      Public
      Cohort extractor tool which can generate dummy data, or real data against OpenSAFELY-compliant research databases
      Python
      •
      Other
      •13•39•129•12•Updated Aug 23, 2024Aug 23, 2024

    • setup-action

      Public
      Shell
      •0•0•4•0•Updated Aug 23, 2024Aug 23, 2024

    • .github

      Public
      Just
      •
      Other
      •0•0•2•3•Updated Jul 17, 2024Jul 17, 2024

    • opentelemetry-opensafely

      Public archive
      Opentelemetry utils for OpenSAFELY
      Just
      •
      Other
      •0•0•0•0•Updated May 1, 2024May 1, 2024