Open Problems in Single-Cell Analysis

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30 packages

methods/simlr
Published Sep 7, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_dimensionality_reduction

179
methods/uce
Published Jan 6, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

178
methods/alra
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

176
methods/dca
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

175
methods/symsim
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

175
control_methods/majority_vote
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

174
methods/combat
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

173
control_methods/embed_cell_types_jittered
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

172
methods/knn_smoothing
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

171
metrics/correlation
Published Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality

171
methods/scdesign2
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

170
methods/srtsim
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

170
control_methods/no_integration
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

170
methods/scanvi
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

170
methods/zinbwave
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

169
metrics/mse
Published Aug 14, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_predict_modality

168
methods/splatter
Published Jul 10, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

168
methods/sparsim
Published Jul 11, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

167
control_methods/positive
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

167
control_methods/random_labels
Published Sep 2, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

166
methods/batchelor_fastmnn
Published Sep 24, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

166
control_methods/no_integration_batch
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

166
methods/magic
Published Jul 3, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_denoising

164
methods/bbknn
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

164
methods/scimilarity_knn
Published Jan 6, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

163
control_methods/embed_cell_types
Published Sep 22, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

162
methods/scvi
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

161
methods/scalex
Published Sep 21, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_batch_integration

160
control_methods/negative
Published Aug 30, 2024 by Open Problems in Single-Cell Analysis in openproblems-bio/task_spatial_simulators

159
methods/scimilarity
Published Jan 6, 2025 by Open Problems in Single-Cell Analysis in openproblems-bio/task_label_projection

156