COBREXA

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6 repositories

AbstractFBCModels.jl
Public
General interface for flux-based constrained metabolic models
metabolic-models file-formats
Julia
•
Apache License 2.0
•1•0•4•0•Updated Mar 3, 2025Mar 3, 2025
COBREXA.jl
Public
COnstraint Based Reconstruction and EXascale Analysis (in Julia)
hpc julia high-performance-computing cobra metabolic-models sbml constraint-based-modeling metabolic-engineering sbml-simulation
Julia
•
Apache License 2.0
•0•11•5•1•Updated Feb 27, 2025Feb 27, 2025
ConstraintTrees.jl
Public
Tidy constraint-programming in tree hierarchies
optimization constrained-optimization
Julia
•
Apache License 2.0
•0•4•2•1•Updated Jan 25, 2025Jan 25, 2025
SBMLFBCModels.jl
Public
AbstractFBCModel interface for SBML.jl
sbml sbml-models
Julia
•
Apache License 2.0
•0•0•0•0•Updated Aug 25, 2024Aug 25, 2024
JSONFBCModels.jl
Public
Reader and writer for JSON metabolic models
cobrapy
Julia
•
Apache License 2.0
•1•0•1•0•Updated Aug 20, 2024Aug 20, 2024
MATFBCModels.jl
Public
Reader and writer for metabolic models in MatLab format
Julia
•
Apache License 2.0
•0•0•1•0•Updated Aug 20, 2024Aug 20, 2024