fix: report known malware even when not labeled

Signed-off-by: behnazh-w <behnaz.hassanshahi@oracle.com>

docs/source/pages/developers_guide/apidoc/macaron.slsa_analyzer.package_registry.rst

@@ -9,6 +9,14 @@ macaron.slsa\_analyzer.package\_registry package
 Submodules
 ----------
 
+macaron.slsa\_analyzer.package\_registry.deps\_dev module
+---------------------------------------------------------
+
+.. automodule:: macaron.slsa_analyzer.package_registry.deps_dev
+   :members:
+   :undoc-members:
+   :show-inheritance:
+
 macaron.slsa\_analyzer.package\_registry.jfrog\_maven\_registry module
 ----------------------------------------------------------------------
 

src/macaron/config/defaults.ini

@@ -1,4 +1,4 @@
-# Copyright (c) 2022 - 2024, Oracle and/or its affiliates. All rights reserved.
+# Copyright (c) 2022 - 2025, Oracle and/or its affiliates. All rights reserved.
 # Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
 
 [requests]
@@ -538,6 +538,11 @@ registry_url_scheme = https
 fileserver_url_netloc = files.pythonhosted.org
 fileserver_url_scheme = https
 
+[deps_dev]
+url_netloc = api.deps.dev
+url_scheme = https
+v3alpha_purl_endpoint = v3alpha/purl
+
 # Configuration options for selecting the checks to run.
 # Both the exclude and include are defined as list of strings:
 #   - The exclude list is used to specify the checks that will not run.

src/macaron/slsa_analyzer/checks/detect_malicious_metadata_check.py

@@ -1,4 +1,4 @@
-# Copyright (c) 2024 - 2024, Oracle and/or its affiliates. All rights reserved.
+# Copyright (c) 2024 - 2025, Oracle and/or its affiliates. All rights reserved.
 # Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
 
 """This check examines the metadata of pypi packages with seven heuristics."""
@@ -11,7 +11,7 @@
 
 from macaron.database.db_custom_types import DBJsonDict
 from macaron.database.table_definitions import CheckFacts
-from macaron.errors import HeuristicAnalyzerValueError
+from macaron.errors import HeuristicAnalyzerValueError, InvalidHTTPResponseError
 from macaron.json_tools import JsonType, json_extract
 from macaron.malware_analyzer.pypi_heuristics.base_analyzer import BaseHeuristicAnalyzer
 from macaron.malware_analyzer.pypi_heuristics.heuristics import HeuristicResult, Heuristics
@@ -28,6 +28,7 @@
 from macaron.slsa_analyzer.build_tool.poetry import Poetry
 from macaron.slsa_analyzer.checks.base_check import BaseCheck
 from macaron.slsa_analyzer.checks.check_result import CheckResultData, CheckResultType, Confidence, JustificationType
+from macaron.slsa_analyzer.package_registry.deps_dev import DepsDevService
 from macaron.slsa_analyzer.package_registry.pypi_registry import PyPIPackageJsonAsset, PyPIRegistry
 from macaron.slsa_analyzer.registry import registry
 from macaron.slsa_analyzer.specs.package_registry_spec import PackageRegistryInfo
@@ -177,7 +178,7 @@ def __init__(self) -> None:
         """Initialize a check instance."""
         check_id = "mcn_detect_malicious_metadata_1"
         description = """This check analyzes the metadata of a package based on reports malicious behavior.
-        Supported ecosystem: PyPI.
+        Supported ecosystem for unknown malware: PyPI.
         """
         super().__init__(check_id=check_id, description=description, eval_reqs=[])
 
@@ -259,21 +260,29 @@ def run_check(self, ctx: AnalyzeContext) -> CheckResultData:
             The result of the check.
         """
         result_tables: list[CheckFacts] = []
-        # First check if this package is a known malware
+        package_registry_info_entries = ctx.dynamic_data["package_registries"]
 
+        # First check if this package is a known malware
         url = "https://api.osv.dev/v1/query"
         data = {"package": {"purl": ctx.component.purl}}
-        response = send_post_http_raw(url, json_data=data, headers=None)
-        res_obj = None
-        if response:
-            try:
-                res_obj = response.json()
-            except requests.exceptions.JSONDecodeError as error:
-                logger.debug("Unable to get a valid response from %s: %s", url, error)
-        if res_obj:
-            for vuln in res_obj.get("vulns", {}):
-                v_id = json_extract(vuln, ["id"], str)
-                if v_id and v_id.startswith("MAL-"):
+
+        try:
+            package_exists = bool(DepsDevService.get_package_info(ctx.component.purl))
+        except InvalidHTTPResponseError as error:
+            logger.debug(error)
+
+        # Known malicious packages must have been removed.
+        if not package_exists:
+            response = send_post_http_raw(url, json_data=data, headers=None)
+            res_obj = None
+            if response:
+                try:
+                    res_obj = response.json()
+                except requests.exceptions.JSONDecodeError as error:
+                    logger.debug("Unable to get a valid response from %s: %s", url, error)
+            if res_obj:
+                for vuln in res_obj.get("vulns", {}):
+                    v_id = json_extract(vuln, ["id"], str)
                     result_tables.append(
                         MaliciousMetadataFacts(
                             known_malware=f"https://osv.dev/vulnerability/{v_id}",
@@ -282,15 +291,16 @@ def run_check(self, ctx: AnalyzeContext) -> CheckResultData:
                             confidence=Confidence.HIGH,
                         )
                     )
-            if result_tables:
-                return CheckResultData(
-                    result_tables=result_tables,
-                    result_type=CheckResultType.FAILED,
-                )
+                if result_tables:
+                    return CheckResultData(
+                        result_tables=result_tables,
+                        result_type=CheckResultType.FAILED,
+                    )
 
-        package_registry_info_entries = ctx.dynamic_data["package_registries"]
+        # If the package is not a known malware, run malware analysis heuristics.
         for package_registry_info_entry in package_registry_info_entries:
             match package_registry_info_entry:
+                # Currently, only PyPI packages are supported.
                 case PackageRegistryInfo(
                     build_tool=Pip() | Poetry(),
                     package_registry=PyPIRegistry() as pypi_registry,

src/macaron/slsa_analyzer/package_registry/deps_dev.py

@@ -0,0 +1,82 @@
+# Copyright (c) 2025 - 2025, Oracle and/or its affiliates. All rights reserved.
+# Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
+
+"""This module contains implementation of deps.dev service."""
+
+import json
+import logging
+import urllib.parse
+from json.decoder import JSONDecodeError
+from urllib.parse import quote as encode
+
+from macaron.config.defaults import defaults
+from macaron.errors import ConfigurationError, InvalidHTTPResponseError
+from macaron.util import send_get_http_raw
+
+logger: logging.Logger = logging.getLogger(__name__)
+
+
+class DepsDevService:
+    """The deps.dev service class."""
+
+    @staticmethod
+    def get_package_info(purl: str) -> dict | None:
+        """Check if the package identified by the PackageURL (PURL) exists and return its information.
+
+        Parameters
+        ----------
+        purl: str
+            The PackageURL (PURL).
+
+        Returns
+        -------
+        dict | None
+            The package metadata or None if it doesn't exist.
+
+        Raises
+        ------
+        InvalidHTTPResponseError
+            If a network error happens or unexpected response is returned by the API.
+        """
+        section_name = "deps_dev"
+        if not defaults.has_section(section_name):
+            return None
+        section = defaults[section_name]
+
+        url_netloc = section.get("url_netloc")
+        if not url_netloc:
+            raise ConfigurationError(
+                f'The "url_netloc" key is missing in section [{section_name}] of the .ini configuration file.'
+            )
+        url_scheme = section.get("url_scheme", "https")
+        v3alpha_purl_endpoint = section.get("v3alpha_purl_endpoint")
+        if not v3alpha_purl_endpoint:
+            raise ConfigurationError(
+                f'The "v3alpha_purl_endpoint" key is missing in section [{section_name}] of the .ini configuration file.'
+            )
+
+        path_params = "/".join([v3alpha_purl_endpoint, encode(purl, safe="")])
+        try:
+            url = urllib.parse.urlunsplit(
+                urllib.parse.SplitResult(
+                    scheme=url_scheme,
+                    netloc=url_netloc,
+                    path=path_params,
+                    query="",
+                    fragment="",
+                )
+            )
+        except ValueError as error:
+            raise InvalidHTTPResponseError("Failed to construct the API URL.") from error
+
+        response = send_get_http_raw(url)
+        if response and response.text:
+            try:
+                metadata: dict = json.loads(response.text)
+            except JSONDecodeError as error:
+                raise InvalidHTTPResponseError(f"Failed to process response from deps.dev for {url}.") from error
+            if not metadata:
+                raise InvalidHTTPResponseError(f"Empty response returned by {url} .")
+            return metadata
+
+        return None

src/macaron/slsa_analyzer/package_registry/jfrog_maven_registry.py

@@ -1,4 +1,4 @@
-# Copyright (c) 2023 - 2024, Oracle and/or its affiliates. All rights reserved.
+# Copyright (c) 2023 - 2025, Oracle and/or its affiliates. All rights reserved.
 # Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
 
 """Assets on a package registry."""
@@ -816,7 +816,7 @@ def download_asset(self, url: str, dest: str) -> bool:
 
         return True
 
-    def find_publish_timestamp(self, purl: str, registry_url: str | None = None) -> datetime:
+    def find_publish_timestamp(self, purl: str) -> datetime:
         """Make a search request to Maven Central to find the publishing timestamp of an artifact.
 
         The reason for directly fetching timestamps from Maven Central is that deps.dev occasionally
@@ -829,8 +829,6 @@ def find_publish_timestamp(self, purl: str, registry_url: str | None = None) ->
         purl: str
             The Package URL (purl) of the package whose publication timestamp is to be retrieved.
             This should conform to the PURL specification.
-        registry_url: str | None
-            The registry URL that can be set for testing.
 
         Returns
         -------

src/macaron/slsa_analyzer/package_registry/maven_central_registry.py

@@ -1,4 +1,4 @@
-# Copyright (c) 2023 - 2024, Oracle and/or its affiliates. All rights reserved.
+# Copyright (c) 2023 - 2025, Oracle and/or its affiliates. All rights reserved.
 # Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
 
 """The module provides abstractions for the Maven Central package registry."""
@@ -182,7 +182,7 @@ def is_detected(self, build_tool: BaseBuildTool) -> bool:
         compatible_build_tool_classes = [Maven, Gradle]
         return any(isinstance(build_tool, build_tool_class) for build_tool_class in compatible_build_tool_classes)
 
-    def find_publish_timestamp(self, purl: str, registry_url: str | None = None) -> datetime:
+    def find_publish_timestamp(self, purl: str) -> datetime:
         """Make a search request to Maven Central to find the publishing timestamp of an artifact.
 
         The reason for directly fetching timestamps from Maven Central is that deps.dev occasionally
@@ -195,8 +195,6 @@ def find_publish_timestamp(self, purl: str, registry_url: str | None = None) ->
         purl: str
             The Package URL (purl) of the package whose publication timestamp is to be retrieved.
             This should conform to the PURL specification.
-        registry_url: str | None
-            The registry URL that can be set for testing.
 
         Returns
         -------

src/macaron/slsa_analyzer/package_registry/package_registry.py

@@ -1,21 +1,16 @@
-# Copyright (c) 2023 - 2024, Oracle and/or its affiliates. All rights reserved.
+# Copyright (c) 2023 - 2025, Oracle and/or its affiliates. All rights reserved.
 # Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
 
 """This module defines package registries."""
 
-import json
 import logging
-import urllib.parse
 from abc import ABC, abstractmethod
 from datetime import datetime
-from urllib.parse import quote as encode
-
-import requests
 
 from macaron.errors import InvalidHTTPResponseError
 from macaron.json_tools import json_extract
 from macaron.slsa_analyzer.build_tool.base_build_tool import BaseBuildTool
-from macaron.util import send_get_http_raw
+from macaron.slsa_analyzer.package_registry.deps_dev import DepsDevService
 
 logger: logging.Logger = logging.getLogger(__name__)
 
@@ -50,7 +45,7 @@ def is_detected(self, build_tool: BaseBuildTool) -> bool:
             based on the given build tool.
         """
 
-    def find_publish_timestamp(self, purl: str, registry_url: str | None = None) -> datetime:
+    def find_publish_timestamp(self, purl: str) -> datetime:
         """Retrieve the publication timestamp for a package specified by its purl from the deps.dev repository by default.
 
         This method constructs a request URL based on the provided purl, sends an HTTP GET
@@ -65,8 +60,6 @@ def find_publish_timestamp(self, purl: str, registry_url: str | None = None) ->
         purl: str
             The Package URL (purl) of the package whose publication timestamp is to be retrieved.
             This should conform to the PURL specification.
-        registry_url: str | None
-            The registry URL that can be set for testing.
 
         Returns
         -------
@@ -86,40 +79,20 @@ def find_publish_timestamp(self, purl: str, registry_url: str | None = None) ->
         # in the AnalyzeContext object retrieved by the Repo Finder. This step should be
         # implemented at the beginning of the analyze command to ensure that the data
         # is available for subsequent processing.
-
-        base_url_parsed = urllib.parse.urlparse(registry_url or "https://api.deps.dev")
-        path_params = "/".join(["v3alpha", "purl", encode(purl, safe="")])
         try:
-            url = urllib.parse.urlunsplit(
-                urllib.parse.SplitResult(
-                    scheme=base_url_parsed.scheme,
-                    netloc=base_url_parsed.netloc,
-                    path=path_params,
-                    query="",
-                    fragment="",
-                )
-            )
-        except ValueError as error:
-            raise InvalidHTTPResponseError("Failed to construct the API URL.") from error
-
-        response = send_get_http_raw(url)
-        if response and response.text:
-            try:
-                metadata: dict = json.loads(response.text)
-            except requests.exceptions.JSONDecodeError as error:
-                raise InvalidHTTPResponseError(f"Failed to process response from deps.dev for {url}.") from error
-            if not metadata:
-                raise InvalidHTTPResponseError(f"Empty response returned by {url} .")
-
+            metadata = DepsDevService.get_package_info(purl)
+        except InvalidHTTPResponseError as error:
+            raise InvalidHTTPResponseError(f"Invalid response from deps.dev for {purl}.") from error
+        if metadata:
             timestamp = json_extract(metadata, ["version", "publishedAt"], str)
             if not timestamp:
-                raise InvalidHTTPResponseError(f"The timestamp is missing in the response returned by {url}.")
+                raise InvalidHTTPResponseError(f"The timestamp is missing in the response returned for {purl}.")
 
             logger.debug("Found timestamp: %s.", timestamp)
 
             try:
                 return datetime.fromisoformat(timestamp)
             except ValueError as error:
-                raise InvalidHTTPResponseError(f"The timestamp returned by {url} is invalid") from error
+                raise InvalidHTTPResponseError(f"The timestamp returned for {purl} is invalid") from error
 
-        raise InvalidHTTPResponseError(f"Invalid response from deps.dev for {url}.")
+        raise InvalidHTTPResponseError(f"Invalid response from deps.dev for {purl}.")

tests/integration/cases/ultralytics/policy.dl

@@ -0,0 +1,10 @@
+/* Copyright (c) 2025 - 2025, Oracle and/or its affiliates. All rights reserved. */
+/* Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/. */
+
+#include "prelude.dl"
+
+Policy("check-malicious-package", component_id, "Check the malicious package.") :-
+    check_passed(component_id, "mcn_detect_malicious_metadata_1").
+
+apply_policy_to("check-malicious-package", component_id) :-
+    is_component(component_id, "pkg:pypi/ultralytics").

tests/integration/cases/ultralytics/test.yaml

@@ -0,0 +1,21 @@
+# Copyright (c) 2025 - 2025, Oracle and/or its affiliates. All rights reserved.
+# Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/.
+
+description: |
+  Analyzing a popular package that some of its versions are compromised.
+
+tags:
+- macaron-python-package
+- macaron-docker-image
+
+steps:
+- name: Run macaron analyze
+  kind: analyze
+  options:
+    command_args:
+    - -purl
+    - pkg:pypi/ultralytics
+- name: Run macaron verify-policy to verify that the malicious metadata check passes.
+  kind: verify
+  options:
+    policy: policy.dl

tests/integration/cases/ultralytics_8.3.46/policy.dl

@@ -0,0 +1,10 @@
+/* Copyright (c) 2025 - 2025, Oracle and/or its affiliates. All rights reserved. */
+/* Licensed under the Universal Permissive License v 1.0 as shown at https://oss.oracle.com/licenses/upl/. */
+
+#include "prelude.dl"
+
+Policy("check-malicious-package", component_id, "Check the malicious package.") :-
+    check_failed(component_id, "mcn_detect_malicious_metadata_1").
+
+apply_policy_to("check-malicious-package", component_id) :-
+    is_component(component_id, "pkg:pypi/ultralytics@8.3.46").