diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/AtomSelectionWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/AtomSelectionWidget.py index e4e9eafcf6..c8c5871831 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/AtomSelectionWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/AtomSelectionWidget.py @@ -190,7 +190,6 @@ def left_widgets(self) -> list[QWidget]: self.combo_boxes = [] for k, v in self.settings.items(): - if isinstance(v, bool): check_layout = QHBoxLayout() checkbox = QCheckBox() diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/CorrelationFramesWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/CorrelationFramesWidget.py index 475a577ebc..ef2a5b63f9 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/CorrelationFramesWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/CorrelationFramesWidget.py @@ -22,7 +22,6 @@ class CorrelationFramesWidget(FramesWidget): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DerivativeOrderWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DerivativeOrderWidget.py index 55d76721eb..9d270296a2 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DerivativeOrderWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DerivativeOrderWidget.py @@ -29,7 +29,6 @@ class DerivativeOrderWidget(WidgetBase): - def __init__(self, *args, **kwargs): super().__init__(*args, layout_type="QHBoxLayout", **kwargs) self._field = QSpinBox(self._base) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DistHistCutoffWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DistHistCutoffWidget.py index 0edcf66527..1a9d59069b 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DistHistCutoffWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/DistHistCutoffWidget.py @@ -18,7 +18,6 @@ class DistHistCutoffWidget(RangeWidget): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/HDFTrajectoryWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/HDFTrajectoryWidget.py index 46de7aa1e5..df93080dcc 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/HDFTrajectoryWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/HDFTrajectoryWidget.py @@ -22,7 +22,6 @@ class HDFTrajectoryWidget(WidgetBase): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) source_object = kwargs.get("source_object", None) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/InputFileWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/InputFileWidget.py index ad51830f1c..b7f126a046 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/InputFileWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/InputFileWidget.py @@ -25,7 +25,6 @@ class InputFileWidget(WidgetBase): - def __init__(self, *args, file_dialog=QFileDialog.getOpenFileName, **kwargs): super().__init__(*args, **kwargs) configurator = kwargs.get("configurator", None) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisCoordinateFileWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisCoordinateFileWidget.py index 699ff6c460..6e32209d0d 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisCoordinateFileWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisCoordinateFileWidget.py @@ -23,7 +23,6 @@ class MDAnalysisCoordinateFileWidget( MultiInputFileWidget, MDAnalysisTopologyFileWidget ): - def __init__(self, *args, file_dialog=QFileDialog.getOpenFileNames, **kwargs): super().__init__( *args, diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisMDTrajTimeStepWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisMDTrajTimeStepWidget.py index 0457e089c2..b8215386a4 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisMDTrajTimeStepWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisMDTrajTimeStepWidget.py @@ -17,7 +17,6 @@ class MDAnalysisMDTrajTimeStepWidget(FloatWidget): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisTopologyFileWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisTopologyFileWidget.py index 2f3ea88807..d6c832b704 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisTopologyFileWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDAnalysisTopologyFileWidget.py @@ -21,7 +21,6 @@ class MDAnalysisTopologyFileWidget(InputFileWidget): - def __init__(self, *args, format_options=sorted(mda._PARSERS.keys()), **kwargs): self.format_options = ["AUTO"] + list(format_options) super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDTrajTopologyFileWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDTrajTopologyFileWidget.py index a85634f9f1..893b97534f 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDTrajTopologyFileWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MDTrajTopologyFileWidget.py @@ -17,7 +17,6 @@ class MDTrajTopologyFileWidget(InputFileWidget): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MultiInputFileWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MultiInputFileWidget.py index 0aea3a9721..cc94abbeff 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MultiInputFileWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/MultiInputFileWidget.py @@ -24,7 +24,6 @@ class MultiInputFileWidget(InputFileWidget): - def __init__(self, *args, file_dialog=QFileDialog.getOpenFileNames, **kwargs): super().__init__( *args, diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/OutputTrajectoryWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/OutputTrajectoryWidget.py index 3854c9a64c..059d2a350d 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/OutputTrajectoryWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/OutputTrajectoryWidget.py @@ -39,7 +39,6 @@ class OutputTrajectoryWidget(WidgetBase): - def __init__(self, *args, **kwargs): super().__init__(*args, layout_type="QGridLayout", **kwargs) default_value = self._configurator.default diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/QVectorsWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/QVectorsWidget.py index 3b4893709d..e5585c7d7a 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/QVectorsWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/QVectorsWidget.py @@ -24,7 +24,6 @@ class VectorModel(QStandardItemModel): - type_changed = Signal() input_is_valid = Signal(bool) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/RangeWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/RangeWidget.py index fb9bb03dda..0fc198860c 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/RangeWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/RangeWidget.py @@ -22,7 +22,6 @@ class RangeWidget(WidgetBase): - def __init__(self, *args, **kwargs): super().__init__(*args, layout_type="QGridLayout", **kwargs) self.setup_fields(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/WidgetBase.py b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/WidgetBase.py index 8591de9f53..86be1bc077 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/WidgetBase.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/InputWidgets/WidgetBase.py @@ -29,7 +29,6 @@ class WidgetBase(QObject): - valid_changed = Signal() value_updated = Signal() value_changed = Signal() diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Session/StructuredSession.py b/MDANSE_GUI/Src/MDANSE_GUI/Session/StructuredSession.py index be8536e4b9..94af2a50a3 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Session/StructuredSession.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Session/StructuredSession.py @@ -29,7 +29,6 @@ class UserSettingsModel(QStandardItemModel): - file_loaded = Signal(str) def __init__(self, *args, settings_filename: str = "", **kwargs): @@ -187,7 +186,6 @@ def writeout_settings(self): class SettingsGroup: - def __init__(self, group_name: str) -> None: self._name = group_name self._settings = {} @@ -261,9 +259,7 @@ def as_dict(self): class SettingsFile: - def __init__(self, name, settings_path: str = None): - if settings_path is None: settings_path = PLATFORM.application_directory() self._top_name = name diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/JobState.py b/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/JobState.py index 9a220476c0..84f812349e 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/JobState.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/JobState.py @@ -17,7 +17,6 @@ class JobState(ABC): - _label = "JobState" _allowed_actions = [] @@ -54,7 +53,6 @@ def fail(self): class Running(JobState): - _label = "Running" _allowed_actions = [ "Pause", @@ -92,7 +90,6 @@ def fail(self): class Aborted(JobState): - _label = "Aborted" _allowed_actions = ["Delete"] @@ -119,7 +116,6 @@ def fail(self): class Failed(JobState): - _label = "Failed" _allowed_actions = ["Delete"] @@ -146,7 +142,6 @@ def fail(self): class Finished(JobState): - _label = "Finished" _allowed_actions = ["Delete"] @@ -173,7 +168,6 @@ def fail(self): class Starting(JobState): - _label = "Starting" _allowed_actions = [ "Pause", @@ -206,7 +200,6 @@ def fail(self): class Paused(JobState): - _label = "Paused" _allowed_actions = [ "Resume", diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/Subprocess.py b/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/Subprocess.py index 3056ab7b33..d321946827 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/Subprocess.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Subprocess/Subprocess.py @@ -26,7 +26,6 @@ class Subprocess(Process): - def __init__(self, *args, **kwargs): super().__init__() job_name = kwargs.get("job_name") diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/InstrumentTab.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/InstrumentTab.py index 0406482504..28ab525b58 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/InstrumentTab.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/InstrumentTab.py @@ -42,7 +42,6 @@ class InstrumentTab(GeneralTab): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._core.add_button("Create Instrument", self._view.add_instrument) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/LoggingTab.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/LoggingTab.py index 2f5df8ea16..9d2f41bfc4 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/LoggingTab.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/LoggingTab.py @@ -36,7 +36,6 @@ class GuiLogHandler(Handler): - def __init__(self, *args, **kwargs): self._visualiser = None super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/JobHolder.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/JobHolder.py index 42329dc4ac..be126de2b6 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/JobHolder.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/JobHolder.py @@ -38,7 +38,6 @@ class JobThread(QThread): - def __init__( self, job_comm: "JobCommunicator", @@ -90,7 +89,6 @@ def run(self): class JobLogHandler(Handler): - def __init__(self): super().__init__() self.records = [] diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlotDataModel.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlotDataModel.py index ce58df9ba6..43e43be239 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlotDataModel.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlotDataModel.py @@ -64,7 +64,6 @@ def populate(self, file): class DataSetItem(BasicPlotDataItem): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._item_type = "dataset" @@ -79,7 +78,6 @@ def file_number(self) -> int: class DataFileItem(BasicPlotDataItem): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._item_type = "file" @@ -92,7 +90,6 @@ def file_number(self) -> int: class MDADataStructure: - def __init__(self, filename: str): self._file = h5py.File(filename) self.check_metadata() diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlottingContext.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlottingContext.py index d31ce8368f..7280973915 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlottingContext.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Models/PlottingContext.py @@ -56,7 +56,6 @@ def get_mpl_colours(): class SingleDataset: - def __init__(self, name: str, source: "h5py.File"): self._name = name self._filename = source.filename @@ -228,7 +227,6 @@ def planes_vs_axis(self, axis_number: int) -> List[np.ndarray]: class SingleCurve: - def __init__(self, data_name: str, file_name: str, *args, **kwargs): self._name = data_name self._filename = file_name @@ -289,7 +287,6 @@ def standard_items(self, key: int) -> List["QStandardItem"]: class PlottingContext(QStandardItemModel): - needs_an_update = Signal() def __init__(self, *args, unit_lookup=None, **kwargs): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/AxesWrapper.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/AxesWrapper.py index 7b8ae58d89..b5ba9c5f4d 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/AxesWrapper.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/AxesWrapper.py @@ -24,7 +24,6 @@ class AxesWrapper: - def __init__(self, *args, **kwargs): self._axes = kwargs.pop("axes", None) self._plot_elements = [] diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/NormGenerator.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/NormGenerator.py index 9e86e0a6a1..2f6ba2bf31 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/NormGenerator.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/NormGenerator.py @@ -18,6 +18,5 @@ class NullNorms: - def __call__(self, *args, **kwds) -> float: return 1.0 diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/WeightGenerator.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/WeightGenerator.py index c0ac7a1054..c4f3d4ad1f 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/WeightGenerator.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotModifiers/WeightGenerator.py @@ -18,6 +18,5 @@ class NullWeights: - def __call__(self, *args, **kwds) -> float: return 1.0 diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotSelectionTab.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotSelectionTab.py index 3d798ac448..ab0d60d6ad 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotSelectionTab.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotSelectionTab.py @@ -37,7 +37,6 @@ class PlotSelectionTab(GeneralTab): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._core.add_button("Load .MDA results", self.load_files) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotTab.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotTab.py index d3fb6dde4b..6b3ca87290 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotTab.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/PlotTab.py @@ -36,7 +36,6 @@ class PlotTab(GeneralTab): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._visualiser._unit_lookup = self diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Grid.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Grid.py index 57526ba5d7..d94ded0577 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Grid.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Grid.py @@ -27,7 +27,6 @@ class Grid(Plotter): - def __init__(self) -> None: super().__init__() self._figure = None diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Heatmap.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Heatmap.py index 2feeb3139e..fea0751b6c 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Heatmap.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Heatmap.py @@ -31,7 +31,6 @@ class Heatmap(Plotter): - def __init__(self) -> None: super().__init__() self._figure = None diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Plotter.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Plotter.py index 564cf42fc4..652cc03043 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Plotter.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Plotter.py @@ -27,7 +27,6 @@ class Plotter(metaclass=SubclassFactory): - def __init__(self) -> None: self._figure = None self._axes = [] diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/PlotterTemplate.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/PlotterTemplate.py index c0334df2a5..8d7ad49328 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/PlotterTemplate.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/PlotterTemplate.py @@ -31,7 +31,6 @@ class PlotterTemplate(metaclass=SubclassFactory): - def __init__(self) -> None: self._figure = None self._axes = {} diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Single.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Single.py index 307d3ad083..df9edd373b 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Single.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Plotters/Single.py @@ -26,7 +26,6 @@ class Single(Plotter): - def __init__(self) -> None: super().__init__() self._figure = None diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/TrajectoryTab.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/TrajectoryTab.py index 7a2a79e661..14c8210242 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/TrajectoryTab.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/TrajectoryTab.py @@ -44,7 +44,6 @@ class TrajectoryTab(GeneralTab): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._core.add_button("Load .MDT Trajectories", self.load_trajectories) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/ActionsTree.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/ActionsTree.py index 06827b9a63..a463cb5818 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/ActionsTree.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/ActionsTree.py @@ -100,6 +100,5 @@ def connect_to_visualiser(self, visualiser: Union[Action, TextInfo]) -> None: self.item_details.connect(visualiser.update_panel) else: raise NotImplementedError( - f"Unable to connect view {type(self)} to visualiser " - f"{type(visualiser)}" + f"Unable to connect view {type(self)} to visualiser {type(visualiser)}" ) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/Delegates.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/Delegates.py index 83df1d672c..66c85b1131 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/Delegates.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/Delegates.py @@ -29,7 +29,6 @@ class ColourPicker(QStyledItemDelegate): - def __init__(self, *args, **kwargs) -> None: super().__init__(*args, **kwargs) @@ -51,7 +50,6 @@ def setModelData(self, editor, model, index): class MainAxisCombo(QItemDelegate): - def __init__(self, *args, **kwargs) -> None: self._items = [] super().__init__(*args, **kwargs) @@ -85,7 +83,6 @@ def currentIndexChanged(self): class MplStyleCombo(QItemDelegate): - def __init__(self, *args, mpl_items=None, **kwargs) -> None: self._items = list([str(x) for x in mpl_items.keys()]) super().__init__(*args, **kwargs) @@ -118,7 +115,6 @@ def currentIndexChanged(self): class RadiusSpinBox(QItemDelegate): - def __init__(self, *args, mpl_items=None, **kwargs) -> None: self._minimum = 0.0 self._step = 0.01 @@ -144,7 +140,6 @@ def valueChanged(self): class ProgressDelegate(QItemDelegate): - progress_role = Qt.UserRole + 1000 def paint(self, painter, option, index): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/PlotDataView.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/PlotDataView.py index bf1ae6f8d3..d4db9f2428 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/PlotDataView.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/PlotDataView.py @@ -148,6 +148,5 @@ def connect_to_visualiser( self.item_details.connect(visualiser.update_panel) else: raise NotImplementedError( - f"Unable to connect view {type(self)} to visualiser " - f"{type(visualiser)}" + f"Unable to connect view {type(self)} to visualiser {type(visualiser)}" ) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/RunTable.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/RunTable.py index 592613c16e..e5a4e7b612 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/RunTable.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/RunTable.py @@ -163,6 +163,5 @@ def connect_to_visualiser(self, visualiser: TextInfo) -> None: self.jobs_logs.connect(visualiser.update_panel) else: raise NotImplementedError( - f"Unable to connect view {type(self)} to visualiser " - f"{type(visualiser)}" + f"Unable to connect view {type(self)} to visualiser {type(visualiser)}" ) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/TrajectoryView.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/TrajectoryView.py index 5837aa6cc7..28c9eb861b 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/TrajectoryView.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Views/TrajectoryView.py @@ -79,6 +79,5 @@ def connect_to_visualiser(self, visualiser: Union[View3D, TrajectoryInfo]) -> No self.item_details.connect(visualiser.update_panel) else: raise NotImplementedError( - f"Unable to connect view {type(self)} to visualiser " - f"{type(visualiser)}" + f"Unable to connect view {type(self)} to visualiser {type(visualiser)}" ) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/Action.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/Action.py index 35b105cdd9..a71be04475 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/Action.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/Action.py @@ -20,35 +20,58 @@ import numpy as np from MDANSE.Framework.Jobs.IJob import IJob from MDANSE.MLogging import LOG -from MDANSE_GUI.InputWidgets import (AseInputFileWidget, AtomMappingWidget, - AtomSelectionWidget, - AtomTransmutationWidget, BackupWidget, - BooleanWidget, ComboWidget, - CorrelationFramesWidget, - DerivativeOrderWidget, - DistHistCutoffWidget, FloatWidget, - FramesWidget, HDFTrajectoryWidget, - InputDirectoryWidget, InputFileWidget, - InstrumentResolutionWidget, IntegerWidget, - InterpolationOrderWidget, - MDAnalysisCoordinateFileWidget, - MDAnalysisMDTrajTimeStepWidget, - MDAnalysisTopologyFileWidget, - MDTrajTopologyFileWidget, MoleculeWidget, - MultiInputFileWidget, - MultipleCombosWidget, OptionalFloatWidget, - OutputDirectoryWidget, OutputFilesWidget, - OutputStructureWidget, - OutputTrajectoryWidget, - PartialChargeWidget, ProjectionWidget, - QVectorsWidget, RangeWidget, - RunningModeWidget, StringWidget, - UnitCellWidget, VectorWidget) +from MDANSE_GUI.InputWidgets import ( + AseInputFileWidget, + AtomMappingWidget, + AtomSelectionWidget, + AtomTransmutationWidget, + BackupWidget, + BooleanWidget, + ComboWidget, + CorrelationFramesWidget, + DerivativeOrderWidget, + DistHistCutoffWidget, + FloatWidget, + FramesWidget, + HDFTrajectoryWidget, + InputDirectoryWidget, + InputFileWidget, + InstrumentResolutionWidget, + IntegerWidget, + InterpolationOrderWidget, + MDAnalysisCoordinateFileWidget, + MDAnalysisMDTrajTimeStepWidget, + MDAnalysisTopologyFileWidget, + MDTrajTopologyFileWidget, + MoleculeWidget, + MultiInputFileWidget, + MultipleCombosWidget, + OptionalFloatWidget, + OutputDirectoryWidget, + OutputFilesWidget, + OutputStructureWidget, + OutputTrajectoryWidget, + PartialChargeWidget, + ProjectionWidget, + QVectorsWidget, + RangeWidget, + RunningModeWidget, + StringWidget, + UnitCellWidget, + VectorWidget, +) from MDANSE_GUI.Tabs.Visualisers.InstrumentInfo import SimpleInstrument from MDANSE_GUI.Widgets.DelayedButton import DelayedButton from qtpy.QtCore import Signal, Slot -from qtpy.QtWidgets import (QCheckBox, QFileDialog, QHBoxLayout, QPushButton, - QTextEdit, QVBoxLayout, QWidget) +from qtpy.QtWidgets import ( + QCheckBox, + QFileDialog, + QHBoxLayout, + QPushButton, + QTextEdit, + QVBoxLayout, + QWidget, +) widget_lookup = { # these all come from MDANSE_GUI.InputWidgets "FloatConfigurator": FloatWidget, diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/DataWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/DataWidget.py index 4ce6f53f7a..8c5c8c4fbf 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/DataWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/DataWidget.py @@ -46,7 +46,6 @@ class DataWidget(QWidget): - change_slider_labels = Signal(object) change_slider_limits = Signal(object) reset_slider_values = Signal(bool) @@ -257,7 +256,7 @@ def plot_data(self, update_only=False): self._current_path = PurePath(os.path.split(dataset._filename)[0]) break except Exception as e: - LOG.error(f"DataWidget error: {e}" f"traceback {format_exc()}") + LOG.error(f"DataWidget error: {e}traceback {format_exc()}") def make_canvas(self): """Creates a matplotlib figure for plotting diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentDetails.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentDetails.py index 3d575cda84..a4be4badcc 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentDetails.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentDetails.py @@ -32,7 +32,6 @@ class InstrumentDetails(QWidget): - instrument_details_changed = Signal(int) def __init__(self, *args, **kwargs): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentInfo.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentInfo.py index 935d30acb2..52738487d5 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentInfo.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/InstrumentInfo.py @@ -24,7 +24,6 @@ class SimpleInstrument: - sample_options = ["isotropic", "crystal"] technique_options = ["QENS", "INS"] resolution_options = [str(x) for x in widget_text_map.keys()] diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/JobLogInfo.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/JobLogInfo.py index a150649dad..c96b9c7f3b 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/JobLogInfo.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/JobLogInfo.py @@ -18,7 +18,6 @@ class JobLogInfo(TextInfo): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self.setStyleSheet("font-family: Courier New;") diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotSettings.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotSettings.py index dc135778bb..9d61bce750 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotSettings.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotSettings.py @@ -28,7 +28,6 @@ class PlotSettings(QWidget): - plot_settings_changed = Signal() def __init__(self, *args, settings=None, **kwargs) -> None: diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotWidget.py index 7dfca46ab5..0405269828 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Tabs/Visualisers/PlotWidget.py @@ -41,7 +41,6 @@ class SliderPack(QWidget): - new_values = Signal(object) def __init__(self, *args, n_sliders=2, **kwargs) -> None: @@ -152,7 +151,6 @@ def collect_values(self): class PlotWidget(QWidget): - change_slider_labels = Signal(object) change_slider_limits = Signal(object) reset_slider_values = Signal(bool) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/UserSettingsEditor.py b/MDANSE_GUI/Src/MDANSE_GUI/UserSettingsEditor.py index 8054ab6462..8b9edaccfc 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/UserSettingsEditor.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/UserSettingsEditor.py @@ -30,7 +30,6 @@ class SettingsView(QTreeView): - def __init__(self, *args, **kwargs) -> None: super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DataDialog.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DataDialog.py index aeb594daf1..5cb857433b 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DataDialog.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DataDialog.py @@ -39,7 +39,7 @@ def __init__( input_data: List[np.ndarray], input_units: List[str], is_input=False, - **kwargs + **kwargs, ): super().__init__(*args, **kwargs) diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DelayedButton.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DelayedButton.py index aaceda17e6..e3228cda7d 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DelayedButton.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/DelayedButton.py @@ -19,7 +19,6 @@ class DelayedButton(QPushButton): - needs_updating = Signal() def __init__(self, *args, **kwargs): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/NotificationTabWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/NotificationTabWidget.py index fa8e386c61..3a13453e35 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/NotificationTabWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/NotificationTabWidget.py @@ -20,7 +20,6 @@ class NotificationTabWidget(QTabWidget): - def __init__(self, *args, **kwargs): super().__init__(*args, **kwargs) self._normal_colours = {} diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionDialog.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionDialog.py index db6c67ea52..680b3fed11 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionDialog.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionDialog.py @@ -25,7 +25,6 @@ class ResolutionDialog(QDialog): - parameters_changed = Signal(dict) def __init__(self, *args, **kwargs): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionWidget.py index 7f895eba92..c019a441e6 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/ResolutionWidget.py @@ -139,7 +139,6 @@ def revert_parameters(values: dict, peak_type: str) -> List[float]: class ResolutionCalculator: - def __init__(self) -> None: self._valid = False self._fwhm_value = 1.0 @@ -251,7 +250,6 @@ def summarise_results(self, rounding_precision=3): class ResolutionWidget(QWidget): - parameters_changed = Signal(dict) def __init__(self, *args, **kwargs): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/RestrictedSlider.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/RestrictedSlider.py index ed9ddef3f8..587fdd6c41 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/RestrictedSlider.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/RestrictedSlider.py @@ -19,7 +19,6 @@ class RestrictedSlider(QSlider): - new_limit = Signal(object) def __init__(self, *args, **kwargs): diff --git a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/VectorWidget.py b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/VectorWidget.py index 568af83f2a..a822822915 100644 --- a/MDANSE_GUI/Src/MDANSE_GUI/Widgets/VectorWidget.py +++ b/MDANSE_GUI/Src/MDANSE_GUI/Widgets/VectorWidget.py @@ -26,7 +26,6 @@ class VectorWidget(QWidget): - value_changed = Signal(list) def __init__(self, *args, dtype=None, **kwargs) -> None: