-
Notifications
You must be signed in to change notification settings - Fork 297
Software references
Oscar Esteban edited this page Sep 19, 2017
·
17 revisions
| Tool | Link (pref. code) | Citation(s) |
|---|---|---|
| recon-all | https://doi.org/10.1006/nimg.1998.0395 | |
| bbregister & BBR | https://doi.org/10.1016/j.neuroimage.2009.06.060 | |
| mri_robust_template | ||
| antsRegistration | https://github.com/ANTsX/ANTs | https://doi.org/10.1016/j.neuroimage.2010.09.025 |
| N4BiasFieldCorrection | https://github.com/ANTsX/ANTs | https://doi.org/10.1109/TMI.2010.2046908 |
| antsBrainRegistration.sh | https://github.com/ANTsX/ANTs | https://doi.org/10.1038/sdata.2015.3 |
| fast | https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FAST | https://doi.org/10.1109/42.906424 |
| flirt | https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FLIRT | https://doi.org/10.1006/nimg.2002.1132; https://doi.org/10.1006/nimg.2002.1132 |
| 3dvolreg | https://afni.nimh.nih.gov/pub/dist/doc/program_help/3dvolreg.html | |
| a/tCompCor | http://nipype.readthedocs.io/en/latest/interfaces/generated/nipype.algorithms.confounds.html#compcor | https://doi.org/10.1016/j.neuroimage.2007.04.042 |