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Issues list

JSON schema: Fastquorum documentation Improvements or additions to documentation
#113 opened Mar 25, 2025 by jen-reeve
15 tasks
nf-test is not being run on the CI on pull requests enhancement New feature or request
#111 opened Mar 12, 2025 by SPPearce
1
Allow the user to specify additional fgbio options enhancement New feature or request
#105 opened Jan 16, 2025 by lbeltrame
5
Query Regarding xGen FFPE Kit Settings Duplex vs Dual UMI
#101 opened Dec 6, 2024 by npatel-ah
2
Update formatting for legibility
#97 opened Dec 2, 2024 by znorgaard
The retry strategy used for memory / cpu usage in FastQC and consensus reads is brittle bug Something isn't working
#73 opened Sep 5, 2024 by lbeltrame
2
Add KAPA to the list of Vendors/Kits enhancement New feature or request
#61 opened Jul 15, 2024 by nh13
1
RFE: Quality trimming in the pipeline enhancement New feature or request
#55 opened Jun 4, 2024 by lbeltrame
1
Improve the output usage enhancement New feature or request
#47 opened May 23, 2024 by nh13
Add additional metrics to MultiQC enhancement New feature or request
#46 opened May 23, 2024 by nh13
1
Use updated fgbio modules in nf-core/modules enhancement New feature or request
#45 opened May 23, 2024 by nh13
Use fgbio-slim when not producing plots enhancement New feature or request
#40 opened May 20, 2024 by nh13
Alternative specification of FASTQs and read structures enhancement New feature or request
#39 opened May 19, 2024 by nh13
Create test datasets for nf-core/fastquorum enhancement New feature or request help wanted Extra attention is needed
#20 opened Feb 15, 2023 by nh13
Add support for more aligners enhancement New feature or request good first issue Good for newcomers
#17 opened Dec 21, 2022 by matthdsm
4
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