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Immcantation

unselected RNA-seq based workflow #264

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unselected RNA-seq based workflow

unselected RNA-seq based workflow #264

Triggered via pull request May 30, 2024 19:23
@ggabernetggabernet
synchronize #334
mapo9:trust4
Status Failure
Total duration 4m 10s
Artifacts 3

ci_immcantation.yml

on: pull_request
Matrix: Run workflow with immcantation devel test_container
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6 errors and 13 warnings
Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
Process completed with exit code 1.
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Process completed with exit code 1.
Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_mm)
Process completed with exit code 1.
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Process completed with exit code 1.
Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_hs)
Process completed with exit code 1.
Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
Process completed with exit code 1.
Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run workflow with immcantation devel test_container (latest-everything, test_raw_immcantation_devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_mm)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_mm)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run workflow with immcantation devel test_container (latest-everything, test_assembled_immcantati...
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_hs)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run workflow with immcantation devel test_container (23.04.0, test_assembled_immcantation_devel_hs)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
Node.js 16 actions are deprecated. Please update the following actions to use Node.js 20: actions/checkout@v3, nf-core/setup-nextflow@v1, actions/upload-artifact@v2. For more information see: https://github.blog/changelog/2023-09-22-github-actions-transitioning-from-node-16-to-node-20/.
Run workflow with immcantation devel test_container (23.04.0, test_raw_immcantation_devel)
The following actions uses node12 which is deprecated and will be forced to run on node16: actions/upload-artifact@v2. For more info: https://github.blog/changelog/2023-06-13-github-actions-all-actions-will-run-on-node16-instead-of-node12-by-default/
Deprecation notice: v1, v2, and v3 of the artifact actions
The following artifacts were uploaded using a version of actions/upload-artifact that is scheduled for deprecation: "logs-test_assembled_immcantation_devel_hs", "logs-test_assembled_immcantation_devel_mm", "logs-test_raw_immcantation_devel". Please update your workflow to use v4 of the artifact actions. Learn more: https://github.blog/changelog/2024-04-16-deprecation-notice-v3-of-the-artifact-actions/

Artifacts

Produced during runtime
Name Size
logs-test_assembled_immcantation_devel_hs Expired
34.3 MB
logs-test_assembled_immcantation_devel_mm Expired
34.3 MB
logs-test_raw_immcantation_devel Expired
67.5 MB