Skip to content

A dynamic attentive graph model for cardiac MRI image reconstrunction of CMRxRecon dataset with PromptUnet for sensitivity map estimation.

Notifications You must be signed in to change notification settings

negarhonarvar/DAGMRNet

Repository files navigation

DAGMRNet: Dynamic Attentive Graph Learning Cardiac MR Image Reconstruction

This repository contains the pytorch implementation of DAGMRNet, a comprehensive model to reconstruct multi coil cardiac MRI in k-space from CMRxRecon 2024 dataset.

Method

This model utilizes a " Dynamic Attentive Graph Learning " model as a denoising network for reconstructing cardiac MRI based on " Self Similarity " Image prior. The Architecture of our proposed model is shown below:

Check the Readme.md of model Directory for more details.

Prerequisites 📋

Required libraries and dependencies are listed as a code block inside the requirements.txt file. run the code below and install them:

pip install -r requirements.txt

Dataset 🫀

This model is trained on Training Set of Multi Coil Cine accelerated cardiac MRI's of CMRxRecon Dataset and evaluated on its Validation Set datas, which are intended for CMR reconstruction evaluation. Check the Link and request for the dataset.

Results 📊

Table: Training Results of the Proposed Model and PromptMR for LVOT, LAX, and SAX

Model PSNR/SSIM Number of Fully Sampled Signals Acceleration Factor Number of Variables Number of Cascades
PromptMR 38.28 / 0.9560 16 4x, 8x, 10× 90 M 12
Proposed Model 37.10 / 0.9510 16 4x, 8x, 10× 16.1 M 4

Training/Inference Codes & Pretrained models 🧠

Current weights of model are accessible in Best Weights Directory Directory of this repository. Set the variable

args.mode == "test"

and enjoy reconstruction your CMR images!

About

A dynamic attentive graph model for cardiac MRI image reconstrunction of CMRxRecon dataset with PromptUnet for sensitivity map estimation.

Topics

Resources

Stars

Watchers

Forks

Releases

No releases published

Packages

No packages published