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revered figure output to the state it had at commit f08b3eca13ae3acd0… Presubmit #116: Commit 38de80e pushed by simonleandergrimm
May 29, 2024 21:18 1m 41s 2024-05-29-recreating-old-fig-4
2024-05-29-recreating-old-fig-4
May 29, 2024 21:18 1m 41s
added temporary way of getting rid of AAV5 in fig 4. Presubmit #115: Commit f08b3ec pushed by simonleandergrimm
May 29, 2024 21:12 1m 35s 2024-05-29-recreating-old-fig-4
2024-05-29-recreating-old-fig-4
May 29, 2024 21:12 1m 35s
reran mgs.py on mgs-workflow data. Presubmit #114: Commit e1c83ce pushed by simonleandergrimm
May 29, 2024 20:34 1m 16s 2024-05-23-model-mgs-workflow-update
2024-05-23-model-mgs-workflow-update
May 29, 2024 20:34 1m 16s
Ported over mgs.py to use new data by Will. Presubmit #113: Commit 8a85117 pushed by simonleandergrimm
May 28, 2024 19:09 44s 2024-05-23-model-mgs-workflow-update
2024-05-23-model-mgs-workflow-update
May 28, 2024 19:09 44s
Added rothman and dropped panel amplified samples Presubmit #112: Commit 6ffee77 pushed by simonleandergrimm
May 28, 2024 17:21 1m 43s 2024-05-20-fig-1-mgs-workflow-update
2024-05-20-fig-1-mgs-workflow-update
May 28, 2024 17:21 1m 43s
dropped usage of pipeline v1 files, with the exception of metadata pa… Presubmit #111: Commit a9fa925 pushed by simonleandergrimm
May 23, 2024 18:34 1m 36s 2024-05-20-fig-1-mgs-workflow-update
2024-05-20-fig-1-mgs-workflow-update
May 23, 2024 18:34 1m 36s
Plot now works more or less. Still need to iron out some minor issues… Presubmit #110: Commit 70e7a6d pushed by simonleandergrimm
May 23, 2024 18:18 2m 16s 2024-05-20-fig-1-mgs-workflow-update
2024-05-20-fig-1-mgs-workflow-update
May 23, 2024 18:18 2m 16s
Stopping execution of code that wasn't yet ported. Presubmit #109: Commit 51a19d3 pushed by simonleandergrimm
May 22, 2024 18:56 1m 35s 2024-05-20-fig-1-mgs-workflow-update
2024-05-20-fig-1-mgs-workflow-update
May 22, 2024 18:56 1m 35s
Edited colors to not intefere with the weaker color in low sample sit… Presubmit #108: Commit 581af5a pushed by simonleandergrimm
March 11, 2024 15:55 1m 59s simon-fig-y
simon-fig-y
March 11, 2024 15:55 1m 59s
Created figure that covers both unenriched and enriched parts of crit… Presubmit #107: Commit 3ec5f50 pushed by simonleandergrimm
March 11, 2024 14:38 2m 6s simon-fig-y
simon-fig-y
March 11, 2024 14:38 2m 6s
Adapted compposite figure 4 script to plot panel-enriched samples. Presubmit #106: Commit 2927cd2 pushed by simonleandergrimm
March 11, 2024 12:04 2m 3s simon-fig-y
simon-fig-y
March 11, 2024 12:04 2m 3s
Created figure to plot relative abudnance of panel-enriched samples Presubmit #105: Commit 7afa941 pushed by simonleandergrimm
March 11, 2024 09:34 2m 2s simon-fig-1c
simon-fig-1c
March 11, 2024 09:34 2m 2s
Started adding tests and simplifying composite figure 1. Note done yet. Presubmit #104: Commit 8a5738f pushed by simonleandergrimm
March 7, 2024 13:31 2m 6s simon-fig-1-add-test
simon-fig-1-add-test
March 7, 2024 13:31 2m 6s
changed eukaryota to homo sapiens. Presubmit #103: Commit 61d1ccb pushed by simonleandergrimm
February 15, 2024 22:17 1m 57s simon-one-off-analyses
simon-one-off-analyses
February 15, 2024 22:17 1m 57s
Created table and figure that builds on figure 1. Presubmit #102: Commit fcc1c0b pushed by simonleandergrimm
February 15, 2024 16:14 1m 59s simon-one-off-analyses
simon-one-off-analyses
February 15, 2024 16:14 1m 59s
used assignments throughut, instead of hits. the latter was confusing… Presubmit #101: Commit cfd696c pushed by simonleandergrimm
February 14, 2024 19:41 2m 12s main
main
February 14, 2024 19:41 2m 12s
Fixed a bug with composite_fig_1.py where some typing changes broke t… Presubmit #100: Commit f58a217 pushed by simonleandergrimm
February 1, 2024 19:20 1m 53s main
main
February 1, 2024 19:20 1m 53s