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environment.yml
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name: spliceai-cpu
channels:
- bioconda
- conda-forge
- defaults
dependencies:
- _libgcc_mutex=0.1=conda_forge
- _openmp_mutex=4.5=1_gnu
- absl-py=1.0.0=pyhd8ed1ab_0
- aniso8601=9.0.1=pyhd8ed1ab_0
- astor=0.8.1=pyh9f0ad1d_0
- async-timeout=4.0.2=pyhd8ed1ab_0
- attrs=21.4.0=pyhd8ed1ab_0
- bzip2=1.0.8=h7f98852_4
- c-ares=1.18.1=h7f98852_0
- ca-certificates=2021.10.8=ha878542_0
- certifi=2021.10.8=py37h89c1867_2
- click=8.1.2=py37h89c1867_0
- curl=7.82.0=h2283fc2_0
- deprecated=1.2.13=pyh6c4a22f_0
- dnspython=1.16.0=py_1
- ecdsa=0.17.0=pyhd8ed1ab_0
- email-validator=1.1.3=pyhd8ed1ab_0
- flask=2.1.1=pyhd8ed1ab_0
- flask-caching=1.10.1=pyhd8ed1ab_0
- flask-cors=3.0.10=pyhd8ed1ab_0
- flask-restful=0.3.9=pyhd8ed1ab_0
- flask-wtf=0.15.1=pyhd3eb1b0_0
- gast=0.5.3=pyhd8ed1ab_0
- gmp=6.2.1=h58526e2_0
- google-pasta=0.2.0=pyh8c360ce_0
- grpcio=1.45.0=py37h0327239_0
- h5py=2.10.0=py37hd6299e0_1
- hdf5=1.10.6=nompi_h3c11f04_101
- idna=3.3=pyhd8ed1ab_0
- importlib-metadata=4.11.3=py37h89c1867_1
- importlib_metadata=4.11.3=hd8ed1ab_1
- iniconfig=1.1.1=pyh9f0ad1d_0
- itsdangerous=2.1.2=pyhd8ed1ab_0
- jinja2=3.1.1=pyhd8ed1ab_0
- keras=2.3.1=py37_0
- keras-applications=1.0.8=py_1
- keras-preprocessing=1.1.2=pyhd8ed1ab_0
- keyutils=1.6.1=h166bdaf_0
- krb5=1.19.3=h08a2579_0
- ld_impl_linux-64=2.36.1=hea4e1c9_2
- libblas=3.9.0=8_openblas
- libcblas=3.9.0=8_openblas
- libcurl=7.82.0=h2283fc2_0
- libdeflate=1.0=h14c3975_1
- libedit=3.1.20191231=he28a2e2_2
- libev=4.33=h516909a_1
- libffi=3.4.2=h7f98852_5
- libgcc-ng=11.2.0=h1d223b6_14
- libgfortran-ng=7.5.0=h14aa051_20
- libgfortran4=7.5.0=h14aa051_20
- libgomp=11.2.0=h1d223b6_14
- libgpuarray=0.7.6=h7f98852_1003
- liblapack=3.9.0=8_openblas
- libnghttp2=1.47.0=he49606f_0
- libnsl=2.0.0=h7f98852_0
- libopenblas=0.3.12=pthreads_hb3c22a3_1
- libpng=1.6.37=h21135ba_2
- libprotobuf=3.20.0=h6239696_0
- libssh2=1.10.0=ha35d2d1_2
- libstdcxx-ng=11.2.0=he4da1e4_14
- libzlib=1.2.11=h166bdaf_1014
- mako=1.2.0=pyhd8ed1ab_1
- markdown=3.3.6=pyhd8ed1ab_0
- markupsafe=2.1.1=py37h540881e_1
- mod_wsgi=4.9.0=py37h540881e_1
- ncurses=6.3=h9c3ff4c_0
- numpy=1.21.5=py37hf2998dd_0
- openssl=3.0.2=h166bdaf_1
- packaging=21.3=pyhd8ed1ab_0
- pandas=1.3.5=py37he8f5f7f_0
- pip=22.0.4=pyhd8ed1ab_0
- pluggy=1.0.0=py37h89c1867_3
- protobuf=3.20.0=py37hd23a5d3_3
- py=1.11.0=pyh6c4a22f_0
- pycryptodome=3.14.1=py37ha6ede69_0
- pyfaidx=0.6.4=pyh5e36f6f_0
- pygpu=0.7.6=py37hb1e94ed_1003
- pyparsing=3.0.7=pyhd8ed1ab_0
- pysam=0.15.3=py37hda2845c_1
- pytest=7.1.1=py37h06a4308_0
- python=3.7.12=hf930737_100_cpython
- python-dateutil=2.8.2=pyhd8ed1ab_0
- python_abi=3.7=2_cp37m
- pytz=2022.1=pyhd8ed1ab_0
- pyyaml=6.0=py37h540881e_4
- readline=8.1=h46c0cb4_0
- redis=5.0.3=h7b6447c_0
- redis-py=4.2.0=pyhd8ed1ab_0
- scipy=1.5.3=py37h8911b10_0
- setuptools=59.8.0=py37h89c1867_1
- six=1.16.0=pyh6c4a22f_0
- spliceai=1.3.1=pyh864c0ab_1
- sqlite=3.37.1=h4ff8645_0
- tensorboard=1.14.0=py37_0
- tensorflow=1.14.0=h4531e10_0
- tensorflow-base=1.14.0=py37h4531e10_0
- tensorflow-estimator=1.14.0=py37h5ca1d4c_0
- termcolor=1.1.0=py_2
- theano=1.0.3=py37hfc679d8_1
- tk=8.6.12=h27826a3_0
- tomli=2.0.1=pyhd8ed1ab_0
- toolchain=2.4.0=0
- toolchain_c_linux-64=2.4.0=0
- toolchain_cxx_linux-64=2.4.0=0
- typing-extensions=4.1.1=hd8ed1ab_0
- typing_extensions=4.1.1=pyha770c72_0
- werkzeug=2.1.1=pyhd8ed1ab_0
- wheel=0.37.1=pyhd8ed1ab_0
- wrapt=1.14.0=py37h540881e_1
- wtforms=3.0.1=pyhd8ed1ab_0
- xz=5.2.5=h516909a_1
- yaml=0.2.5=h7f98852_2
- zipp=3.8.0=pyhd8ed1ab_0
- zlib=1.2.11=h166bdaf_1014
prefix: /home/adminbioinfo/miniconda3/envs/spliceai-cpu