-
Notifications
You must be signed in to change notification settings - Fork 8
/
Copy pathDockerfile
192 lines (178 loc) · 8.48 KB
/
Dockerfile
1
2
3
4
5
6
7
8
9
10
11
12
13
14
15
16
17
18
19
20
21
22
23
24
25
26
27
28
29
30
31
32
33
34
35
36
37
38
39
40
41
42
43
44
45
46
47
48
49
50
51
52
53
54
55
56
57
58
59
60
61
62
63
64
65
66
67
68
69
70
71
72
73
74
75
76
77
78
79
80
81
82
83
84
85
86
87
88
89
90
91
92
93
94
95
96
97
98
99
100
101
102
103
104
105
106
107
108
109
110
111
112
113
114
115
116
117
118
119
120
121
122
123
124
125
126
127
128
129
130
131
132
133
134
135
136
137
138
139
140
141
142
143
144
145
146
147
148
149
150
151
152
153
154
155
156
157
158
159
160
161
162
163
164
165
166
167
168
169
170
171
172
173
174
175
176
177
178
179
180
181
182
183
184
185
186
187
188
189
190
191
192
ARG RAILS_ENV="production"
ARG NODE_VERSION="14.16.1"
ARG YARN_VERSION="1.22.5"
ARG RUBY_VERSION="2.7.2"
ARG BUNDLER_VERSION="2.2.8"
ARG UID=1000
ARG GID=1000
FROM node:${NODE_VERSION}-buster-slim as node
FROM ruby:${RUBY_VERSION} as ruby-fits
RUN apt-get update && apt-get install -y \
build-essential \
libpcre3-dev \
cmake \
#swig \
&& apt-get clean \
&& rm -rf /var/lib/apt/lists/*
#RUN git clone https://github.com/swig/swig.git
RUN wget http://prdownloads.sourceforge.net/swig/swig-4.0.2.tar.gz
RUN tar xvzf swig-4.0.2.tar.gz
RUN cd swig-4.0.2 && ./configure && make && make install
RUN wget https://www.ir.isas.jaxa.jp/~cyamauch/sli/sllib-1.4.5a.tar.gz
RUN gzip -dc sllib-1.4.5a.tar.gz | tar xvf -
RUN cd sllib-1.4.5a && make && make install32
RUN wget https://www.ir.isas.jaxa.jp/~cyamauch/sli/sfitsio-1.4.5.tar.gz
RUN gzip -dc sfitsio-1.4.5.tar.gz | tar xvf -
RUN cd sfitsio-1.4.5 \
&& make && make install32
RUN git clone https://github.com/yuasatakayuki/RubyFits.git
RUN mkdir -p RubyFits/swig/build && cd RubyFits/swig/build && cmake .. && make install
RUN cp /root/lib/ruby/* /usr/local/lib/ruby/site_ruby/
From ruby:${RUBY_VERSION} as build-python
RUN apt-get update \
&& apt-get install -y python3-pip \
&& apt-get install -y libopencv-dev
RUN git clone https://github.com/misasa/image_mosaic.git
RUN pip3 install -r /image_mosaic/requirements.txt \
&& pip3 install /image_mosaic
From ruby:${RUBY_VERSION} as build
ARG RAILS_ENV
ARG BUNDLER_VERSION
ARG YARN_VERSION
ARG UID
ARG GID
RUN apt-get update -qq && DEBIAN_FRONTEND=noninteractive apt-get -yq dist-upgrade &&\
DEBIAN_FRONTEND=noninteractive apt-get install -yq --no-install-recommends\
ghostscript \
postgresql-client &&\
apt-get clean &&\
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/* &&\
truncate -s 0 /var/log/*log
COPY --from=ruby-fits /usr/local/lib/ruby/site_ruby/RubyFits.rb /usr/local/lib/ruby/site_ruby/RubyFits.rb
COPY --from=ruby-fits /usr/local/lib/ruby/site_ruby/fits.so /usr/local//lib/ruby/site_ruby/fits.so
COPY --from=build-python /usr/lib/x86_64-linux-gnu/libSM.so.6 /usr/lib/x86_64-linux-gnu/libSM.so.6
COPY --from=build-python /usr/lib/x86_64-linux-gnu/libICE.so.6 /usr/lib/x86_64-linux-gnu/libICE.so.6
COPY --from=build-python /usr/local/lib/python3.7 /usr/local/lib/python3.7
COPY --from=build-python /usr/local/bin/make_tiles /usr/local/bin/make_tiles
COPY --from=build-python /usr/local/bin/image_in_image /usr/local/bin/image_in_image
COPY --from=build-python /usr/local/bin/Haffine_from_points /usr/local/bin/Haffine_from_points
COPY --from=build-python /usr/local/bin/H_from_points /usr/local/bin/H_from_points
COPY --from=build-python /usr/local/bin/transform_points /usr/local/bin/transform_points
COPY ImageMagick-6-policy.xml /etc/ImageMagick-6/policy.xml
RUN mkdir -p /opt
COPY --from=node /opt/yarn-v${YARN_VERSION} /opt/yarn
COPY --from=node /usr/local/bin/node /usr/local/bin/
COPY --from=node /usr/local/lib/node_modules/ /usr/local/lib/node_modules/
RUN ln -s /opt/yarn/bin/yarn /usr/local/bin/yarn \
&& ln -s /opt/yarn/bin/yarn /usr/local/bin/yarnpkg \
&& ln -s /usr/local/bin/node /usr/local/bin/nodejs \
&& ln -s /usr/local/lib/node_modules/npm/bin/npm-cli.js /usr/local/bin/npm \
&& ln -s /usr/local/lib/node_modules/npm/bin/npm-cli.js /usr/local/bin/npx
RUN groupadd -g ${GID} medusa
RUN useradd -m --home-dir /medusa -u ${UID} -g ${GID} medusa
USER medusa
WORKDIR /medusa
COPY --chown=medusa:medusa Gemfile Gemfile.lock /medusa/
RUN gem install bundler --version ${BUNDLER_VERSION} && \
bundle config set --local path 'vendor/bundler'
RUN if [ "${RAILS_ENV}" = "production" ]; then \
bundle config set --local without 'development test'; \
fi
RUN bundle install
COPY --chown=medusa:medusa package.json yarn.lock /medusa/
RUN yarn install && yarn cache clean
RUN mkdir /medusa/app
RUN mkdir /medusa/log
RUN mkdir /medusa/config
RUN mkdir /medusa/db
RUN mkdir -p /medusa/public/assets
RUN mkdir -p /medusa/public/packs
COPY --chown=medusa:medusa Rakefile /medusa/
COPY --chown=medusa:medusa config/boot.rb \
config/application.rb \
config/environment.rb \
config/routes.rb \
config/schedule.rb \
config/database.yml \
config/application.yml \
config/google.yml \
config/webpacker.yml \
config/search_column_types.yml \
config/age_unit.yml \
config/sample_type.yml \
config/material_classification.yml \
config/earthchem_parameter.tsv \
config/earthchem_technique.tsv \
/medusa/config/
COPY --chown=medusa:medusa config/environments /medusa/config/environments
COPY --chown=medusa:medusa config/initializers /medusa/config/initializers
COPY --chown=medusa:medusa config/locales /medusa/config/locales
COPY --chown=medusa:medusa config/unicorn /medusa/config/unicorn
COPY --chown=medusa:medusa config/webpack /medusa/config/webpack
COPY --chown=medusa:medusa app/models/application_record.rb /medusa/app/models/application_record.rb
COPY --chown=medusa:medusa app/models/unit.rb /medusa/app/models/unit.rb
COPY --chown=medusa:medusa app/models/user.rb /medusa/app/models/user.rb
COPY --chown=medusa:medusa lib /medusa/lib
COPY --chown=medusa:medusa app/webpack /medusa/app/webpack
COPY --chown=medusa:medusa app/assets /medusa/app/assets
COPY --chown=medusa:medusa bin /medusa/bin
COPY --chown=medusa:medusa postcss.config.js /medusa/postcss.config.js
COPY --chown=medusa:medusa public/assets /medusa/public/assets
RUN if [ "${RAILS_ENV}" = "production" ]; then \
bundle exec rake assets:precompile &&\
rm -rf node_modules/*; \
fi
COPY --chown=medusa:medusa app /medusa/app
COPY --chown=medusa:medusa config.ru /medusa/config.ru
COPY --chown=medusa:medusa db/schema.rb db/seeds.rb /medusa/db/
COPY --chown=medusa:medusa db/migrate /medusa/db/migrate
COPY --chown=medusa:medusa README.md /medusa/README.md
COPY --chown=medusa:medusa LICENSE /medusa/LICENSE
COPY --chown=medusa:medusa spec /medusa/spec
ENV PATH $PATH:/medusa/bin
From ruby:${RUBY_VERSION}-slim as prod
ARG RAILS_ENV
ARG YARN_VERSION
ARG UID
ARG GID
RUN apt-get update -qq && DEBIAN_FRONTEND=noninteractive apt-get -yq dist-upgrade &&\
DEBIAN_FRONTEND=noninteractive apt-get install -yq --no-install-recommends\
python3 \
file \
ghostscript \
imagemagick \
libpq-dev \
postgresql-client \
shared-mime-info &&\
apt-get clean &&\
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/* &&\
truncate -s 0 /var/log/*log
COPY --from=ruby-fits /usr/local/lib/ruby/site_ruby/RubyFits.rb /usr/local/lib/ruby/site_ruby/RubyFits.rb
COPY --from=ruby-fits /usr/local/lib/ruby/site_ruby/fits.so /usr/local//lib/ruby/site_ruby/fits.so
COPY --from=build-python /usr/lib/x86_64-linux-gnu/libSM.so.6 /usr/lib/x86_64-linux-gnu/libSM.so.6
COPY --from=build-python /usr/lib/x86_64-linux-gnu/libICE.so.6 /usr/lib/x86_64-linux-gnu/libICE.so.6
COPY --from=build-python /usr/lib/x86_64-linux-gnu/libXrender.so.1 /usr/lib/x86_64-linux-gnu/libXrender.so.1
COPY --from=build-python /usr/local/lib/python3.7 /usr/local/lib/python3.7
COPY --from=build-python /usr/local/bin/make_tiles /usr/local/bin/make_tiles
COPY --from=build-python /usr/local/bin/image_in_image /usr/local/bin/image_in_image
COPY --from=build-python /usr/local/bin/Haffine_from_points /usr/local/bin/Haffine_from_points
COPY --from=build-python /usr/local/bin/H_from_points /usr/local/bin/H_from_points
COPY --from=build-python /usr/local/bin/transform_points /usr/local/bin/transform_points
COPY ImageMagick-6-policy.xml /etc/ImageMagick-6/policy.xml
# Install Node.js and Yarn
RUN mkdir -p /opt
COPY --from=node /opt/yarn-v${YARN_VERSION} /opt/yarn
COPY --from=node /usr/local/bin/node /usr/local/bin/
COPY --from=node /usr/local/lib/node_modules/ /usr/local/lib/node_modules/
RUN ln -s /opt/yarn/bin/yarn /usr/local/bin/yarn \
&& ln -s /opt/yarn/bin/yarn /usr/local/bin/yarnpkg \
&& ln -s /usr/local/bin/node /usr/local/bin/nodejs \
&& ln -s /usr/local/lib/node_modules/npm/bin/npm-cli.js /usr/local/bin/npm \
&& ln -s /usr/local/lib/node_modules/npm/bin/npm-cli.js /usr/local/bin/npx
RUN groupadd -g ${GID} medusa
RUN useradd -m --home-dir /medusa -u ${UID} -g ${GID} medusa
USER medusa
WORKDIR /medusa
COPY --chown=medusa:medusa --from=build /medusa /medusa
COPY --chown=medusa:medusa --from=build /usr/local/bundle/config /usr/local/bundle/config
ENV PATH $PATH:/medusa/bin