yaml file error

[andrew-korea]

I'm trying to create a new conda env using the SubGNN.yml file but I get a ResolvePackageNotFound error for the following two packages:

• torchvision==0.5.0=py37_cu101
• pytorch==1.4.0=py3.7_cuda10.1.243_cudnn7.6.3_0

How do I solve this problem? I'm running the code in ubuntu 18.04 with Python 3.7.

[mfernezir]

Hi @andrew-korea !

Did you maybe solve it with a newer PyTorch version?

I've cleaned up the yaml file for the PyTorch 1.4 version, but there is still a problem for GIN embeddings. Those require a newer torch-sparse, which in turn doesn't work with 1.4 without manual hacks.

EDIT:
I now have a working version for PyTorch 1.5. I'll attach it here for others who might need it.
SubGNN_final_torch_1.5.yml.txt

[mfernezir]

Hi @Shoug22!

I was using this in a Docker container that has CUDA 10.1 and Ubuntu 18.04, Miniconda 23.3.1, and Python 3.7.6 env. If you have a different CUDA version, Python, or use Windows, you'll need some modifications.

[Isabellajhon]

@mfernezir

Did you reproduce the repository without an error ?

[mfernezir]

@Isabellajhon I'm no longer working with this repo, but yes, I got it running with the env file I posted without errors.