v7.4.13

What's Changed

No changes to existing modeling.

Decreases ...No namespace defined for... warnings when loading the schema.

• Add raw GH ids for schema files by @turbomam in #812
• pyproject.toml update/cleanup by @turbomam in #814
• Expressing biosample -> two libraries, with existing terms by @turbomam in #817
• add nmdc_yaml prefix; comment out some others by @turbomam in #816

Full Changelog: v7.4.12...v7.4.13

v7.4.12

What's Changed

• added mixs slots req by submission schema to Biosample by @turbomam in #808
• more mixs slots and better testing by @turbomam in #810

Includes better testing of the jsonshema artifacts and fixes the workflow for adding MIxS slots to the Biosample class adn dynamically regenerating the mixs.yaml

Full Changelog: v.7.4.11...v7.4.12

v.7.4.11

What's Changed

• classes on index page should be hierarchically indented by @sujaypatil96 in #800
• Notebook instantiates a ReadQcAnalysisActivity with multiple base/read counts and validates by @turbomam in #802
• add 7.4.11 version to nmdc.yaml by @turbomam in #804
• change pyproject.toml version 0.0.0 to 7.4.11 by @turbomam in #805

Full Changelog: v7.4.10...v.7.4.11

v7.4.10

What's Changed

• DataObject examples by @turbomam in #758
• better grammar in src/docs/schema-validation.md -> 'Schema validation' by @turbomam in #762
• initial boolean ranges script by @turbomam in #769
• add comparison of boolean usage to global slot by @turbomam in #770
• terser modeling by @turbomam in #765
• non file type enum changes by @turbomam in #779
• remove all DNAse mentions in src/schema by @turbomam in #785
• no more bioscales.yaml by @turbomam in #786
• file type enum changes only by @turbomam in #778
• Fix some minor typos in the file type enums by @turbomam in #787
• add static docs in deploy-docs.yaml GH action by @turbomam in #788
• wfmsa typecode for MetagenomeSequencingActivity by @turbomam in #791
• Some MIxS ranges should be set to something other than TextValue, like GeolocationValue for lat_lot by @turbomam in #790

Full Changelog: v7.4.9...v7.4.10

v7.4.9

What's Changed

• Expose usage report by @turbomam in #743
• Added air_PM_concen and 'air particulate matter concentration' just in case by @turbomam in #744
• backmerge main into new mixs terms branch by @turbomam in #745
• Add abs_air_humidity for sheets and friends by @turbomam in #746
• Batch addition of MIxS terms from sheets friends by @turbomam in #747
• added abs_air_humidity (again?) by @turbomam in #750
• bulk with abs_air_humidity by @turbomam in #751
• remove mixs backups by @turbomam in #752
• regen plus DataObject-MB-unknown-enum-pv.yaml example; mixs_template.yaml cleanup; link cleanup in static MD docs by @turbomam in #753

Full Changelog: v7.4.8...v7.4.9

v7.4.8

What's Changed

• Associate host_taxid with Biosample via sheets_and_friends "do shuttle" by @turbomam in #733
• Add host_taxid example by @turbomam in #736
• new path to jsonschema artifact by @turbomam in #738
• removed old NMDC metadata downloads link by @turbomam in #740
• Minimal submission portal retrieval by @turbomam in #741

Full Changelog: v7.4.7...v7.4.8

v7.4.7

What's Changed

• Removed whitespace from get_nmdc_yaml_bytesIO's filepath by @turbomam in #732

Full Changelog: v7.4.6...v7.4.7

v7.4.6

What's Changed

• try using sheets-and-friends subsetter here! by @turbomam in #715
• start cleaning up assets esp python by @turbomam in #717
• Fix automated deployment of docs by @turbomam in #722
• Out of control regen by @turbomam in #726
• Refactor names of generated artifacts by @turbomam in #729
• update file_name_patterns by @Michal-Babins in #704

New Contributors

• @Michal-Babins made their first contribution in #704

Full Changelog: v7.4.5...v7.4.6

v7.4.5

What's Changed

• Issue 709 wekrflow refreshed by @turbomam in #710
• Werkflow branch by @turbomam in #706
• Create Biosample usage report, with from_mixs indicator by @turbomam in #707
• Subsetted mixs by @turbomam in #702
• patterns materialized in jsonschema artifact by @turbomam in #713

Full Changelog: v7.4.4...v7.4.5

v7.4.4

What's Changed

• Back to copying by @turbomam in #697

Full Changelog: v7.4.3...v7.4.4