From 624cbb2fc5bfde0af899e28b53619fecd9fc5be0 Mon Sep 17 00:00:00 2001
From: luciorq <luciorqueiroz@gmail.com>
Date: Mon, 21 Oct 2024 15:27:25 -0400
Subject: [PATCH] refactor: remove dependency on pipe

---
 R/install_packages.R | 6 ++----
 R/run.R              | 4 ++--
 man/run.Rd           | 4 ++--
 3 files changed, 6 insertions(+), 8 deletions(-)

diff --git a/R/install_packages.R b/R/install_packages.R
index ad7521b..d95b124 100644
--- a/R/install_packages.R
+++ b/R/install_packages.R
@@ -20,8 +20,7 @@ install_packages <- function(packages,
       packages = NULL,
       env_name = env_name,
       verbose = verbose
-    ) |>
-      invisible()
+    )
   }
   channels_arg <- format_channels_args(
     additional_channels,
@@ -42,7 +41,6 @@ install_packages <- function(packages,
     packages,
     verbose = verbose
   )
-  px_res$stdout |>
-    cat()
+  cat(px_res$stdout)
   invisible(px_res$status)
 }
diff --git a/R/run.R b/R/run.R
index ef269d1..d8b5e89 100644
--- a/R/run.R
+++ b/R/run.R
@@ -45,10 +45,10 @@
 #' run("ls", "-l")
 #'
 #' ## Run a command in a specific Conda environment
-#' run("python script.py", env_name = "my-conda-env")
+#' run("python", "script.py", env_name = "my-python-env")
 #'
 #' ## Run a command with additional arguments
-#' run("my-command", "--arg1", "--arg2=value", env_name = "my-conda-env")
+#' run("my-command", "--arg1", "--arg2=value", env_name = "my-python-env")
 #' }
 #' @seealso
 #' \code{\link{install_micromamba}}, \code{\link{create_env}}
diff --git a/man/run.Rd b/man/run.Rd
index 66af632..94ac63e 100644
--- a/man/run.Rd
+++ b/man/run.Rd
@@ -64,10 +64,10 @@ This is particularly useful for reproducible research and ensuring that specific
 run("ls", "-l")
 
 ## Run a command in a specific Conda environment
-run("python script.py", env_name = "my-conda-env")
+run("python", "script.py", env_name = "my-python-env")
 
 ## Run a command with additional arguments
-run("my-command", "--arg1", "--arg2=value", env_name = "my-conda-env")
+run("my-command", "--arg1", "--arg2=value", env_name = "my-python-env")
 }
 }
 \seealso{