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@lerdruplab

Lerdrup Lab

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  1. ew-qctrimalign ew-qctrimalign Public

    Nextflow

  2. visualizations visualizations Public

    Collection of r-scripts for visalization

    R

  3. rnaseq rnaseq Public

    Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

    Nextflow

  4. differentialabundance differentialabundance Public

    Forked from nf-core/differentialabundance

    Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

    Nextflow

  5. sra_scripts sra_scripts Public

    Forked from erkutilaslan/sra_scripts

    general purpose scripts for sratools workflows

    Shell

  6. hpc_scripts hpc_scripts Public

    Forked from erkutilaslan/hpc_scripts

    general purpose scripts for hpc workflows

    Shell

Repositories

Showing 8 of 8 repositories
  • H2A.Z Public

    A collection of scripts used for H2A.Z paper

    R 0 0 0 0 Updated Apr 14, 2025
  • sra_scripts Public Forked from erkutilaslan/sra_scripts

    general purpose scripts for sratools workflows

    Shell 0 1 0 0 Updated Apr 10, 2025
  • visualizations Public

    Collection of r-scripts for visalization

    R 0 0 0 0 Updated Apr 7, 2025
  • ew-qctrimalign Public
    Nextflow 0 MIT 0 0 0 Updated Mar 25, 2025
  • hpc_scripts Public Forked from erkutilaslan/hpc_scripts

    general purpose scripts for hpc workflows

    Shell 0 1 0 0 Updated Mar 25, 2025
  • encode_scripts Public Forked from kacparas/bioinformatic_tools

    general purpose scripts for encode workflows

    R 0 1 0 0 Updated Feb 21, 2025
  • differentialabundance Public Forked from nf-core/differentialabundance

    Differential abundance analysis for feature/ observation matrices from platforms such as RNA-seq

    Nextflow 0 MIT 46 0 0 Updated Oct 9, 2024
  • rnaseq Public Forked from nf-core/rnaseq

    RNA sequencing analysis pipeline using STAR, RSEM, HISAT2 or Salmon with gene/isoform counts and extensive quality control.

    Nextflow 0 MIT 751 0 0 Updated Oct 9, 2024