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Rename stats variables and more logging cleanup
CI #2022: Commit 6346333 pushed by marcelm
March 10, 2025 22:30 1m 54s logging
March 10, 2025 22:30 1m 54s
Rename tot_all_tried to tried_alignment
CI #2021: Commit d0571fb pushed by marcelm
March 10, 2025 22:30 2m 7s remove-unused
March 10, 2025 22:30 2m 7s
Update baseline commit
CI #2020: Commit 2242903 pushed by marcelm
March 7, 2025 16:03 2m 10s main
March 7, 2025 16:03 2m 10s
Fix: Sort partial seeds
CI #2019: Commit 6f44c9f pushed by marcelm
March 7, 2025 15:27 2m 2s sort-partial-seeds
March 7, 2025 15:27 2m 2s
Fix: Sort partial seeds
CI #2018: Commit 280461b pushed by marcelm
March 7, 2025 10:11 1m 36s sort-partial-seeds
March 7, 2025 10:11 1m 36s
Noncanonical syncmers
CI #2017: Commit 8b35111 pushed by marcelm
February 27, 2025 17:39 1m 18s noncanonical3
February 27, 2025 17:39 1m 18s
PartialHit is no longer needed
CI #2016: Commit 85ee85d pushed by marcelm
February 27, 2025 17:39 46s base-first
February 27, 2025 17:39 46s
Merge pull request #482 from ksahlin/fix-mcs-r
CI #2015: Commit c805bd2 pushed by marcelm
February 27, 2025 14:35 2m 13s main
February 27, 2025 14:35 2m 13s
Fix incorrect match start coordinates when adding partial matches
CI #2014: Pull request #482 synchronize by marcelm
February 25, 2025 22:06 4s fix-mcs-r
February 25, 2025 22:06 4s
Update baseline commit
CI #2013: Commit 73aee97 pushed by marcelm
February 25, 2025 22:06 2m 2s fix-mcs-r
February 25, 2025 22:06 2m 2s
Fix incorrect match start coordinates when adding partial matches
CI #2012: Pull request #482 opened by marcelm
February 25, 2025 22:04 5s fix-mcs-r
February 25, 2025 22:04 5s
Fix incorrect match start coordinates when adding partial matches
CI #2011: Commit 848c0dd pushed by marcelm
February 25, 2025 21:34 1m 5s fix-mcs-r
February 25, 2025 21:34 1m 5s
February 21, 2025 14:26 1m 32s
Skip inconsistent NAMs when mapping single-end reads
CI #2009: Commit b14f20e pushed by marcelm
February 21, 2025 13:59 1m 32s skip-inconsistent
February 21, 2025 13:59 1m 32s
Show badge for main branch
CI #2008: Commit e6f4dc2 pushed by marcelm
February 20, 2025 17:42 2m 30s main
February 20, 2025 17:42 2m 30s
v0.15.0 + enable mcs by default
CI #2007: Commit 45174f3 pushed by marcelm
February 6, 2025 15:07 1m 44s mcs-0150
February 6, 2025 15:07 1m 44s
Merge pull request #480 from ksahlin/paf-unmapped
CI #2006: Commit 02bb627 pushed by marcelm
February 6, 2025 08:30 1m 32s main
February 6, 2025 08:30 1m 32s
Clarify that PAF omits unmapped reads
CI #2005: Pull request #480 opened by marcelm
February 5, 2025 22:36 4s paf-unmapped
February 5, 2025 22:36 4s
Clarify that PAF omits unmapped reads
CI #2004: Commit f15b751 pushed by marcelm
February 5, 2025 22:35 1m 48s paf-unmapped
February 5, 2025 22:35 1m 48s
Rename stats variables and more logging cleanup
CI #2003: Commit bfca05d pushed by marcelm
January 29, 2025 22:57 3m 53s logging
January 29, 2025 22:57 3m 53s
PartialHit is no longer needed
CI #2002: Commit 2a7b4f5 pushed by marcelm
January 29, 2025 22:16 1m 10s base-first
January 29, 2025 22:16 1m 10s
Merge pull request #479 from ksahlin/revert-basehash
CI #2001: Commit c0695b0 pushed by marcelm
January 29, 2025 22:11 2m 23s main
January 29, 2025 22:11 2m 23s
Revert PR #472 "Always pick first syncmer as base"
CI #2000: Pull request #479 synchronize by marcelm
January 29, 2025 22:07 4s revert-basehash
January 29, 2025 22:07 4s
Changelog
CI #1999: Commit 6b0e8c8 pushed by marcelm
January 29, 2025 22:07 3m 5s revert-basehash
January 29, 2025 22:07 3m 5s
Changelog
CI #1998: Commit 6b0e8c8 pushed by marcelm
January 29, 2025 21:58 2m 38s base-hash
January 29, 2025 21:58 2m 38s