DESCRIPTION

Package: IceR
Type: Package
Title: Requantification of label-free DDA proteomics data pre-analyzed by MaxQuant.
Version: 0.9.16
Author: Mathias Kalxdorf
Maintainer: Mathias Kalxdorf <mathiaskalxdorf@gmail.com>
Description: This package allows performing requantification of label-free DDA proteomics data pre-analyzed by MaxQuant. 
License: GPL-3
Encoding: UTF-8
LazyData: true
Depends:
    R (>= 3.6)
biocViews:
Imports:
    data.table,
    foreach,
    doParallel,
    parallel,
    doSNOW,
    dplyr,
    ff,
    gplots,
    grDevices,
    heatmaply,
    Hmisc,
    lubridate,
    MASS,
    matrixStats,
    methods,
    mgcv,
    openxlsx,
    Peptides,
    pheatmap,
    plotly,
    plyr,
    randomcoloR,
    randomForest,
    raster,
    readMzXmlData,
    robustbase,
    seqinr,
    shiny,
    shinyFiles,
    shinyjs,
    stringr,
    tibble,
    tidyr,
    rChoiceDialogs,
    tcltk,
    snow
Suggests:
    cleaver,
    PECA,
    limma,
    vsn
RoxygenNote: 7.1.1