Graph embeddings of Hi-C data using LINE. Representations are obtained by modiying code obtained from SCI.
Sub-compartment Identifier (SCI)
Authors: Haitham Ashoor, Sheng Li Contact: haitham.ashoor@jax.org, sheng.li@jax.org
SCI is a program to identify sub-compartments from HiC data. SCI utilizes graph embedding followed by K-means clustering in order to predict sub-compartments from HiC data.