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My_project.tex
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\documentclass[12pt,twoside]{article}
\usepackage{ifxetex}
\usepackage{textpos}
\usepackage{lscape}
\usepackage{natbib}
\usepackage[a4paper,hmargin=2.8cm,vmargin=2.0cm,includeheadfoot]{geometry}
\usepackage{tabularx,longtable,multirow,subcaption,caption}
\usepackage{fancyhdr}
\usepackage{color}
\usepackage{amsmath}
\usepackage{graphicx}
\usepackage{array}
\usepackage{enumerate}
\usepackage{adjustbox}
\usepackage{url}
\usepackage{graphicx}
\makeatletter
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\makeatother
\newcommand{\reporttitle}{Project Title}
\newcommand{\reportauthor}{Name}
%%%%%%%%%%%%%%%%%%%%%%%%%%%%
\begin{document}
% front page
\input{titlepage}
\newpage
\newpage
\tableofcontents
\thispagestyle{empty}
\newpage
% lists
\thispagestyle{empty}
\listoffigures
\listoftables
\newpage
%%%%%%%%%%%%%%%%%%%%%%%%%%%% Main document
\section*{Abstract}
\addcontentsline{toc}{section}{\protect\numberline{}Abstract}
Abstract
\section{Introduction}
Introduction
\section{Methodology}
\begin{figure*}[tbhp]
\centering
\includegraphics[width=0.65\textwidth, angle=0]{figures/raypath.png}
\caption[SKS/SKKS raypaths] {SKS and SKKS raypaths from a variety of source-receiver arc distances.}
\label{raypath}
\end{figure*}
\begin{equation}
s(H,\kappa) = \sum_{j=1}^{N} w_{1}r_{j}(t_{1}) + w_{2}r_{j}(t_{2}) - w_{3}r_{j}(t_{3}),
\label{HKobjective}
\end{equation}
where $w_{1}$, $w_{2}$, $w_{3}$ are weights, $r_{j}(t_{i})$ are the receiver function amplitudes at the predicted arrival-times of the direct $P$-to-$S$ conversion $Ps$ and subsequent reverberations $PpPs$ and $PsPs + PpSs$ respectively for the $j$th receiver function. $N$ is the number of receiver functions used. The predicted travel-times, $t_{i}$ are given by Equations \ref{RFStravelT1}--\ref{RFStravelT3}.
\begin{equation}
t_{1}= H\left[{\sqrt{\frac{1}{V_{S}^{2}}-p^{2}} - \sqrt{\frac{1}{V_{P}^{2}}-p^{2}}} \,\right],
\label{RFStravelT1}
\end{equation}
\begin{equation}
t_{2}=H\left[{\sqrt{\frac{1}{V_{S}^{2}}-p^{2}} + \sqrt{\frac{1}{V_{P}^{2}}-p^{2}}}\,\right],
\label{RFStravelT2}
\end{equation}
\begin{equation}
t_{3}=2H\sqrt{\frac{1}{V_{S}^{2}}-p^{2}},
\label{RFStravelT3}
\end{equation}
where $p$ is the ray parameter (skm$^{-1}$).
\subsection{Dataset}
\subsection{Model}
Model description (Fig. \ref{model_structure})
\begin{figure*}[tbhp]
\centering
\includegraphics[width=0.4\textwidth, angle=0]{figures/dl_model_structure_full.png}
\vspace{0.5cm}
\includegraphics[width=0.75\textwidth, angle=0]{figures/unsupervised_structure.png}
\caption[Model Structure] {Top: DL structure. Bottom: ML structure. \citep{vwxg}}
\label{model_structure}
\end{figure*}
\section{Discussion}
Discussion
\newpage
\section{Conclusions}
Conclusions
\newpage
\section*{Acknowledgments}
Acknowledgements
\appendix
\section{Appendices}
\subsection{First appendix}
\begin{longtable}{|l|l|l|l|l|l|l|l|l|}
\caption[Listing of teleseismic earthquake hypocentres.]
{{\label{tabquakes}} Listing of teleseismic earthquake hypocentral information. Data come from the IRIS Data Management Center SeismiQuery website.} \\
\hline
Year & Mo. & Day & Time& Latitude & Longitude & Depth (km) & mb & Phase \\ \hline
\endfirsthead
\caption[]{\emph{continued}}\\
\hline
Year & Mo. & Day & Time& Lat. ($^{\circ}$) & Lon. ($^{\circ}$) & Dep. (km) & mb & Phase \\ \hline
\hline \endhead
\hline
\multicolumn{7}{l}{\emph{continued on next page}} \\
\endfoot
\hline\endlastfoot
2001 & 10 & 30 & 21:04:24.8 & 28.580$^{\circ}$N & 128.280$^{\circ}$E & 135 & 5.7 & P \\
2001 & 11 & 14 & 09:26:10.0 & 35.950$^{\circ}$N & 090.540$^{\circ}$E & 10 & 8.0 & P,S \\
2001 & 11 & 15 & 01:03:06.1 & 01.590$^{\circ}$S & 015.580$^{\circ}$W & 10 & 6.3 & P,S \\
2001 & 11 & 18 & 21:59:52.5 & 35.730$^{\circ}$N & 093.690$^{\circ}$E & 10 & 5.9 & P,S \\
2001 & 11 & 19 & 17:45:23.5 & 35.750$^{\circ}$N & 093.670$^{\circ}$E & 10 & 5.7 & P \\
2001 & 11 & 20 & 21:08:18.5 & 06.880$^{\circ}$S & 128.920$^{\circ}$E & 33 & 6.3 & P \\
2001 & 11 & 23 & 20:43:03.6 & 36.390$^{\circ}$N & 071.510$^{\circ}$E & 106 & 6.1 & P,S \\
2001 & 11 & 25 & 14:31:57.8 & 23.030$^{\circ}$N & 125.360$^{\circ}$E & 10 & 5.6 & P \\
2001 & 11 & 28 & 14:32:32.7 & 15.570$^{\circ}$N & 093.110$^{\circ}$W & 84 & 6.4 & P \\
2001 & 12 & 02 & 02:47:56.3 & 12.740$^{\circ}$S & 166.660$^{\circ}$E & 100 & 6.0 & P \\
2001 & 12 & 02 & 13:01:53.7 & 39.400$^{\circ}$N & 141.090$^{\circ}$E & 123 & 6.5 & P,S \\
2001 & 12 & 04 & 18:09:26.7 & 18.950$^{\circ}$N & 120.240$^{\circ}$E & 33 & 5.5 & P \\
2001 & 12 & 05 & 07:46:37.8 & 52.610$^{\circ}$S & 018.350$^{\circ}$E & 10 & 5.7 & P \\
2001 & 12 & 07 & 19:11:31.9 & 05.650$^{\circ}$S & 130.740$^{\circ}$E & 111 & 5.7 & P \\
2001 & 12 & 07 & 19:27:34.1 & 44.220$^{\circ}$S & 168.820$^{\circ}$E & 10 & 6.1 & P \\
2001 & 12 & 08 & 20:29:34.2 & 28.250$^{\circ}$N & 129.570$^{\circ}$E & 33 & 6.2 & P,S \\
2001 & 12 & 09 & 18:15:02.6 & 00.000$^{\circ}$N & 122.870$^{\circ}$E & 156 & 6.2 & P \\
2001 & 12 & 12 & 12:53:18.4 & 17.190$^{\circ}$S & 167.720$^{\circ}$E & 33 & 6.2 & P \\
2001 & 12 & 12 & 14:02:35.1 & 42.810$^{\circ}$S & 124.690$^{\circ}$E & 10 & 7.1 & P \\
2001 & 12 & 13 & 13:50:46.4 & 27.040$^{\circ}$N & 044.500$^{\circ}$W & 10 & 5.7 & P \\
2001 & 12 & 23 & 22:52:54.3 & 09.600$^{\circ}$S & 159.530$^{\circ}$E & 16 & 7.0 & S \\
2001 & 12 & 27 & 10:54:51.8 & 14.650$^{\circ}$S & 167.260$^{\circ}$E & 153 & 6.2 & P \\
2001 & 12 & 29 & 14:32:22.6 & 06.010$^{\circ}$S & 102.850$^{\circ}$E & 33 & 5.8 & P,S \\
2002 & 01 & 01 & 11:29:22.7 & 06.300$^{\circ}$N & 125.650$^{\circ}$E & 138 & 6.3 & P \\
2002 & 01 & 02 & 17:22:48.8 & 17.600$^{\circ}$S & 167.860$^{\circ}$E & 21 & 7.5 & P,S \\
2002 & 01 & 03 & 07:05:27.7 & 36.090$^{\circ}$N & 070.690$^{\circ}$E & 129 & 6.2 & P,S \\
2002 & 01 & 03 & 10:17:36.3 & 17.660$^{\circ}$S & 168.000$^{\circ}$E & 10 & 6.7 & P,S \\
2002 & 01 & 09 & 06:45:57.5 & 38.660$^{\circ}$N & 069.900$^{\circ}$E & 33 & 5.3 & P \\
2002 & 01 & 10 & 05:56:03.5 & 17.570$^{\circ}$S & 167.910$^{\circ}$E & 10 & 5.7 & P \\
2002 & 01 & 16 & 23:09:52.1 & 15.500$^{\circ}$N & 093.130$^{\circ}$W & 80 & 6.4 & P,S \\
2002 & 01 & 22 & 04:53:52.7 & 35.790$^{\circ}$N & 026.620$^{\circ}$E & 88 & 6.3 & S \\
2002 & 01 & 24 & 18:12:05.3 & 03.530$^{\circ}$N & 095.660$^{\circ}$E & 33 & 5.7 & P \\
2002 & 02 & 01 & 21:55:21.0 & 45.460$^{\circ}$N & 136.720$^{\circ}$E & 355 & 6.2 & P \\
2002 & 02 & 03 & 07:11:28.4 & 38.570$^{\circ}$N & 031.270$^{\circ}$E & 5 & 6.5 & P \\
2002 & 02 & 03 & 09:26:43.4 & 38.630$^{\circ}$N & 030.900$^{\circ}$E & 10 & 6.0 & P \\
2002 & 02 & 07 & 03:15:53.5 & 03.030$^{\circ}$N & 126.290$^{\circ}$E & 33 & 5.8 & P,S \\
2002 & 02 & 10 & 01:47:06.2 & 55.910$^{\circ}$S & 029.000$^{\circ}$W & 193 & 6.0 & P \\
2002 & 02 & 11 & 16:18:33.7 & 40.090$^{\circ}$N & 050.210$^{\circ}$E & 54 & 5.0 & P \\
2002 & 02 & 12 & 03:27:25.9 & 23.720$^{\circ}$N & 121.560$^{\circ}$E & 54 & 5.8 & P \\
2002 & 02 & 14 & 23:23:13.5 & 14.990$^{\circ}$N & 092.640$^{\circ}$W & 75 & 5.8 & P \\
2002 & 02 & 24 & 02:24:31.6 & 05.650$^{\circ}$S & 130.750$^{\circ}$E & 109 & 5.6 & P \\
2002 & 03 & 03 & 12:08:07.8 & 36.430$^{\circ}$N & 070.440$^{\circ}$E & 209 & 6.3 & P \\
2002 & 03 & 03 & 12:08:19.7 & 36.500$^{\circ}$N & 070.480$^{\circ}$E & 225 & 7.4 & P \\
2002 & 03 & 05 & 21:16:09.1 & 06.030$^{\circ}$N & 124.250$^{\circ}$E & 31 & 7.5 & P \\
2002 & 03 & 07 & 07:10:13.5 & 01.320$^{\circ}$S & 024.480$^{\circ}$W & 10 & 5.1 & P,S \\
2002 & 03 & 08 & 18:27:53.2 & 05.870$^{\circ}$N & 124.270$^{\circ}$E & 23 & 6.0 & P \\
2002 & 03 & 09 & 12:27:11.2 & 56.020$^{\circ}$S & 027.330$^{\circ}$W & 118 & 6.0 & P \\
2002 & 03 & 11 & 01:46:20.7 & 30.600$^{\circ}$N & 141.570$^{\circ}$E & 33 & 5.9 & P,S \\
2002 & 03 & 17 & 03:37:19.9 & 00.680$^{\circ}$N & 122.320$^{\circ}$E & 79 & 5.8 & P \\
2002 & 03 & 17 & 19:33:33.8 & 45.220$^{\circ}$S & 035.110$^{\circ}$E & 10 & 6.0 & P,S \\
2002 & 03 & 19 & 22:14:15.0 & 06.490$^{\circ}$S & 129.900$^{\circ}$E & 148 & 6.1 & P,S \\
2002 & 03 & 22 & 17:36:59.2 & 04.590$^{\circ}$N & 126.320$^{\circ}$E & 76 & 5.7 & P \\
2002 & 03 & 23 & 05:15:51.4 & 01.390$^{\circ}$N & 128.110$^{\circ}$E & 115 & 5.7 & P \\
2002 & 03 & 25 & 14:56:33.8 & 36.060$^{\circ}$N & 069.320$^{\circ}$E & 8 & 6.2 & P,S \\
2002 & 03 & 26 & 03:45:48.7 & 23.350$^{\circ}$N & 124.090$^{\circ}$E & 33 & 6.6 & P,S \\
2002 & 03 & 27 & 08:52:52.3 & 36.020$^{\circ}$N & 069.340$^{\circ}$E & 10 & 5.9 & P \\
2002 & 03 & 28 & 04:56:22.4 & 21.660$^{\circ}$S & 068.330$^{\circ}$W & 125 & 6.5 & S \\
2002 & 03 & 31 & 06:52:50.5 & 24.280$^{\circ}$N & 122.180$^{\circ}$E & 32 & 7.4 & P,S \\
2002 & 03 & 31 & 22:49:09.6 & 53.880$^{\circ}$N & 035.370$^{\circ}$W & 10 & 5.2 & P \\
2002 & 04 & 10 & 00:13:43.2 & 44.130$^{\circ}$S & 015.990$^{\circ}$W & 10 & 5.4 & P \\
2002 & 04 & 10 & 10:04:50.7 & 44.180$^{\circ}$S & 015.860$^{\circ}$W & 10 & 5.3 & P \\
2002 & 04 & 10 & 21:47:22.0 & 43.990$^{\circ}$S & 015.910$^{\circ}$W & 10 & 5.2 & P \\
2002 & 04 & 12 & 04:00:23.7 & 35.960$^{\circ}$N & 069.420$^{\circ}$E & 10 & 5.9 & P,S \\
2002 & 04 & 12 & 16:26:01.6 & 35.880$^{\circ}$N & 069.260$^{\circ}$E & 10 & 4.9 & P \\
2002 & 04 & 14 & 04:05:24.0 & 07.320$^{\circ}$N & 126.660$^{\circ}$E & 33 & 5.6 & P \\
2002 & 04 & 18 & 14:17:23.9 & 60.660$^{\circ}$S & 025.840$^{\circ}$W & 10 & 5.8 & P \\
2002 & 04 & 26 & 16:06:07.0 & 13.090$^{\circ}$N & 144.620$^{\circ}$E & 85 & 7.1 & S \\
2002 & 05 & 12 & 23:12:52.9 & 01.140$^{\circ}$S & 127.090$^{\circ}$E & 33 & 5.9 & S \\
2002 & 05 & 13 & 19:54:43.1 & 19.140$^{\circ}$N & 121.240$^{\circ}$E & 33 & 5.5 & P \\
2002 & 05 & 13 & 19:57:22.9 & 19.120$^{\circ}$N & 121.240$^{\circ}$E & 33 & 5.8 & P \\
2002 & 05 & 14 & 14:19:03.4 & 03.510$^{\circ}$N & 125.380$^{\circ}$E & 33 & 5.5 & P \\
2002 & 05 & 14 & 14:56:49.4 & 36.500$^{\circ}$S & 078.740$^{\circ}$E & 10 & 4.9 & P \\
2002 & 05 & 14 & 16:56:10.4 & 36.520$^{\circ}$S & 078.930$^{\circ}$E & 10 & 6.3 & P,S \\
\end{longtable}
\newpage
\newpage
\subsection{Second appendix}
More stuff here...
%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%% Now adding the bibliography at the end. %%%%%%%%%%%%%%%%%%%
%%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%% %%%%%%%%%%%%%%%%%%%
\newpage
\bibliographystyle{agufull08}
\addcontentsline{toc}{section}{\protect\numberline{}References}
\bibliography{clean_ref}
\end{document}